PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010099437.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 559aa    MW: 61308.9 Da    PI: 7.193
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010099437.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.13.7e-33208265260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+  d++++ei+Y+g+Hnh+k
  XP_010099437.1 208 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERAL-DGQITEIVYKGSHNHPK 265
                     8****************************************.***************85 PP
2WRKY105.62.6e-33377435159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+
  XP_010099437.1 377 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 435
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-28202266IPR003657WRKY domain
PROSITE profilePS5081123.858202266IPR003657WRKY domain
SuperFamilySSF1182903.66E-25206266IPR003657WRKY domain
SMARTSM007743.2E-36207265IPR003657WRKY domain
PfamPF031061.3E-25208264IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-37362437IPR003657WRKY domain
SuperFamilySSF1182902.88E-29369437IPR003657WRKY domain
PROSITE profilePS5081138.377372437IPR003657WRKY domain
SMARTSM007743.1E-39377436IPR003657WRKY domain
PfamPF031068.9E-26378435IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009753Biological Processresponse to jasmonic acid
GO:0009788Biological Processnegative regulation of abscisic acid-activated signaling pathway
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MASSSGSLDT SANSYPNFTF PSHPFMTTSF SDLLASGGDD AAGEPIRPER TGWGAGVPKF  60
KSLPPPSLPI SPPSVSPSSY FAIPAGLSPA ELLDSPVLLN SSNILPSPTT GTFAAHASNW  120
KTTNQQSVKQ EDKNFSDFSF QTQTRPPTSS QSLIFQSSNS SSQAAWNNYQ EPTKQDVKPE  180
FANKSNDFQT EYNNYPLQSH QSLSRRSDDG YNWRKYGQKQ VKGSENPRSY YKCTYPNCPT  240
KKKVERALDG QITEIVYKGS HNHPKPQSTR RSSSSSSAIQ SSTNEIVSDQ SYVCSQGNGQ  300
VDSCVATPEN SSISVGDDEF EQSSQKSKSG GDEFDEDEPD AKRWKREGEN EGISAPGSRT  360
VREPRVVVQT TSDIDILDDG YRWRKYGQKV VKGNPNPRSY YKCTNPGCPV RKHVERASHD  420
LRAVITTYEG KHNHDVPAAR GSSSVNRPLP NNPATTTNNN AVTAIRPSAM AHNNNTTTNM  480
HHHSSNNHPL QSLRLQSSEG QMPFTLEMLQ GPAGSFGFNA GFGNSTSSYM TQSQLTESVY  540
SKTKEEPRDD NSFLDSLLC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37208438878Probable WRKY transcription factor 4
2lex_A1e-37208438878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription repressor (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (By similarity). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000250|UniProtKB:Q6QHD1}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010099437.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:25110688). Slightly down-regulated by gibberellic acid (GA) (By similarity). Accumulates in response to jasmonic acid (MeJA) (PubMed:16919842). {ECO:0000250|UniProtKB:Q6IEQ7, ECO:0000269|PubMed:16919842, ECO:0000269|PubMed:25110688}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024023353.10.0probable WRKY transcription factor 26
SwissprotQ6B6R41e-144WRK24_ORYSI; WRKY transcription factor WRKY24
TrEMBLW9RA340.0W9RA34_9ROSA; Putative WRKY transcription factor 33
STRINGXP_010099437.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF107734114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-110WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]