PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010098722.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 26303.1 Da PI: 8.7186 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.7 | 1.5e-19 | 48 | 93 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+teEd++l ++v+++G+++W++I+r++ gR++k+c++rw + XP_010098722.1 48 KGPWSTEEDQILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 93 79*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.3e-16 | 102 | 144 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++ Ede + a++++G++ W+tIar ++ gRt++ +k++w++ XP_010098722.1 102 PFSSAEDETIMAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 144 7999****************.*********.***********986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 27.214 | 43 | 98 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.73E-31 | 45 | 141 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.2E-16 | 47 | 96 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 2.3E-18 | 48 | 93 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.3E-24 | 49 | 101 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 5.94E-16 | 50 | 92 | No hit | No description |
SMART | SM00717 | 1.9E-13 | 99 | 147 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS51294 | 19.995 | 100 | 149 | IPR017930 | Myb domain |
CDD | cd00167 | 4.41E-11 | 102 | 145 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 5.6E-22 | 102 | 148 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.7E-13 | 102 | 144 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MNNNNINNYY MTTRPCSSSA SSTSDSSSSD QSTPTRGNNS GPKPDRIKGP WSTEEDQILT 60 RLVERYGPRN WSLISRYIKG RSGKSCRLRW CNQLSPTVEH RPFSSAEDET IMAAHARYGN 120 RWATIARLLP GRTDNAVKNH WNSTLKRRAV GDAYSPQNSN LEGGCCGIGG ASTSAGPVLP 180 EEDPLTALTL APPGIMAAER RTESVPDGFW DVMKGVIARE VREYVSSAFS DNISGFHSNS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h88_C | 8e-43 | 44 | 149 | 54 | 159 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 8e-43 | 44 | 149 | 54 | 159 | MYB PROTO-ONCOGENE PROTEIN |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010098722.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010098722.1 | 1e-178 | transcription factor MYB73 | ||||
Refseq | XP_010113113.1 | 1e-178 | transcription factor MYB73 | ||||
Swissprot | O23160 | 1e-58 | MYB73_ARATH; Transcription factor MYB73 | ||||
TrEMBL | W9RIK8 | 1e-177 | W9RIK8_9ROSA; Transcription factor | ||||
STRING | XP_010098722.1 | 1e-178 | (Morus notabilis) | ||||
STRING | XP_010113113.1 | 1e-178 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5074 | 32 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 5e-60 | myb domain protein 73 |
Link Out ? help Back to Top | |
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Entrez Gene | 21383742 | 21408770 |
Publications ? help Back to Top | |||
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