PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098011.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 332aa    MW: 37055.1 Da    PI: 6.567
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098011.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.21.5e-22139199259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqK++ ++++pr+YYrCt +   gC+++k+ ++ +++p ++ +tY g+H+++
  XP_010098011.1 139 DDGHAWRKYGQKMILKAKHPRHYYRCTNKydqGCQATKQFQKIQDNPPIFRTTYCGHHTCR 199
                     8**************************998899**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-23124199IPR003657WRKY domain
SuperFamilySSF1182906.02E-22133199IPR003657WRKY domain
PROSITE profilePS5081119.072133196IPR003657WRKY domain
SMARTSM007744.7E-33138200IPR003657WRKY domain
PfamPF031068.0E-22139199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MASSPLPENV LSGRQKLIDE LVQGREIANR LQTLLSQPVG DDGSLVNSAE DLVSRIMESF  60
TNTLFMLNKN GTVEAVLSQI QAAAATSSRV DSPCLDGRKS EDSGESCRSV STTLKDRRGC  120
YKRRKAAHTW QRETSTSIDD GHAWRKYGQK MILKAKHPRH YYRCTNKYDQ GCQATKQFQK  180
IQDNPPIFRT TYCGHHTCRN LLRAPELVFD STSPNQDSSL LLSFKDSNNL NNLTPQQAHH  240
FFSSLTSVKH EEFKDIEPAC NSSVTVAGQK NQSSSSDYIV SSDQYHDDDL TAFDQSPGHM  300
TVMSSNLDSD IHGDVISGVI SFDDDVLQHL NF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-21137199769OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098011.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098011.10.0probable WRKY transcription factor 70
TrEMBLW9RUP90.0W9RUP9_9ROSA; Putative WRKY transcription factor 70
STRINGXP_010098011.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-45WRKY DNA-binding protein 70