PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010097543.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

FAR1

Protein Properties

Length: 270aa MW: 30704.6 Da PI: 7.6886

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010097543.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	91.1	1.5e-28	106	193	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p XP_010097543.1 106 FYNAYATRIGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 193 ****************************************9988..9************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.4E-26	106	193	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MMYTWNWKFM KGNFLIVAVE FGVDGDVNGD ILRNSVEVET SRGGDDNETG GSSVEGAFQQ 60 DQHEKMDQDS SGIDIIPVGV PATSVVQADE PYVGQEFESE ASAHAFYNAY ATRIGFVIRV 120 SKLSRSRRDG SAIGRALVCN KEGYRMPDKR EKIVRQRAET RVGCRAMILV RKVSSGKWVV 180 TKFVKEHTHP LTPGKGRRDC IYDQYPNEHD KIRELSQQLA IEKKRAATYK RHLELIFEHI 240 EEHNESLSNK IQHIVDSVKG METKEEQSRR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010097543.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010097543.2	0.0	protein FAR1-RELATED SEQUENCE 5
TrEMBL	W9RTC0	0.0	W9RTC0_9ROSA; Uncharacterized protein
STRING	XP_010097543.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2453	30	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-104	FAR1 family protein

Link Out ? help Back to Top
Entrez Gene	21407482