PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096284.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 299aa    MW: 33209.4 Da    PI: 9.4524
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096284.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.82.6e-181156147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+ eEdell  +v+++G+++W+ I+r ++ gR++k+c++rw + 
   XP_010096284.1 11 KGPWSHEEDELLQSLVQRYGPRNWSIISRSIP-GRSGKSCRLRWCNQ 56
                     79******************************.***********985 PP
2Myb_DNA-binding57.43.2e-1865107347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++++eEd+++v+a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_010096284.1  65 PFSAEEDDIIVHAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 107
                      89******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.603657IPR017930Myb domain
SuperFamilySSF466891.29E-318104IPR009057Homeodomain-like
SMARTSM007172.1E-151059IPR001005SANT/Myb domain
PfamPF002491.6E-171156IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-241264IPR009057Homeodomain-like
CDDcd001671.78E-141355No hitNo description
PROSITE profilePS5129426.37258112IPR017930Myb domain
SMARTSM007171.5E-1562110IPR001005SANT/Myb domain
PfamPF002492.6E-1565107IPR001005SANT/Myb domain
CDDcd001671.97E-1265108No hitNo description
Gene3DG3DSA:1.10.10.602.6E-2365111IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MESSQRDDKV KGPWSHEEDE LLQSLVQRYG PRNWSIISRS IPGRSGKSCR LRWCNQLSPE  60
VQHRPFSAEE DDIIVHAHAK YGNKWATIAR LLNGRTDNAI KNHWNSTLKR KCSSAIDDGV  120
MLLDAELSIL RPRKRLASAP PASFSGLCYS SSSPSGSDAS DSAAPVTSLP RVFRPVARTG  180
AILPPSTQVE SPSQKDNKII VNDSFSEPST LLTLSMPGTG SVERPNRDSD PHREVKTTSA  240
QQEKKNAISF GPEFLSLMQE MIRKEVRDYM ADIEKNLEVS RSEGVRNVGV KRIGITKLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A2e-40101123105MYB PROTO-ONCOGENE PROTEIN
1mse_C2e-40101123105C-Myb DNA-Binding Domain
1msf_C2e-40101123105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096284.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096284.20.0transcription factor MYB44
SwissprotO231601e-82MYB73_ARATH; Transcription factor MYB73
TrEMBLW9RBU50.0W9RBU5_9ROSA; Transcription factor
STRINGXP_010096284.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.14e-65myb domain protein r1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]