PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095320.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB
Protein Properties Length: 304aa    MW: 32625.7 Da    PI: 8.3746
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095320.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.44.4e-20550147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + 
   XP_010095320.1  5 KGPWSPEEDEALQKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 50
                     79******************************.***********985 PP
2Myb_DNA-binding55.61.2e-1759101347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T++Ede +++a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_010095320.1  59 AFTPDEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 101
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129429.907155IPR017930Myb domain
SuperFamilySSF466891.72E-32298IPR009057Homeodomain-like
SMARTSM007176.4E-18453IPR001005SANT/Myb domain
PfamPF002491.3E-19550IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.5E-26658IPR009057Homeodomain-like
CDDcd001673.09E-17749No hitNo description
SMARTSM007171.5E-1456104IPR001005SANT/Myb domain
PROSITE profilePS5129420.87757106IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.1E-2359105IPR009057Homeodomain-like
PfamPF002493.7E-1559101IPR001005SANT/Myb domain
CDDcd001675.16E-1259102No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0010200Biological Processresponse to chitin
GO:0046686Biological Processresponse to cadmium ion
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MDRIKGPWSP EEDEALQKLV QKHGPRNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRAF  60
TPDEDETIIR AHARFGNKWA TIARLLNGRT DNAIKNHWNS TLKRKCSTMF DDCNGHGYDG  120
SFAAQQPLKR SVSAGSAMPV STGLFMSPGS PSGSDVSDSS VPVVISPPSS SYVYRPVART  180
GAVLPPPVEA ASSSNDPPTS LSLSLPGVDS CDSNQNASSP LPPTVNFLTA VTPSTAAPAL  240
ASDAENGAFV PFSQELLAVM QEMIRKEVRS YMAGLEQQSN NGVCSAVDGF RNVAVKRIGI  300
SKIE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gv2_A1e-4141063105MYB PROTO-ONCOGENE PROTEIN
1mse_C9e-4241063105C-Myb DNA-Binding Domain
1msf_C9e-4241063105C-Myb DNA-Binding Domain
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00476DAPTransfer from AT4G37260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095320.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3239200.0KT323920.1 Morus alba var. multicaulis isolate LOC122703569 transcription factor MYB39-like protein (MYB1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095320.20.0transcription factor MYB44
SwissprotO231601e-109MYB73_ARATH; Transcription factor MYB73
TrEMBLW9QYL10.0W9QYL1_9ROSA; Transcription factor
STRINGXP_010095320.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.13e-96myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]