PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010093540.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 331aa    MW: 37603.9 Da    PI: 5.7792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010093540.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.26e-22137197259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqK++ + ++pr+YYrCt +   gC+++k+v++ +e p ++ +tY g+H ++
  XP_010093540.1 137 DDGHAWRKYGQKMIIKGKHPRHYYRCTNKydqGCQATKQVQKIQESPPIFRTTYCGHHICR 197
                     8**************************998899*************************885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-23121197IPR003657WRKY domain
PROSITE profilePS5081120.105131194IPR003657WRKY domain
SuperFamilySSF1182907.06E-22131197IPR003657WRKY domain
SMARTSM007743.6E-31136198IPR003657WRKY domain
PfamPF031065.3E-21137196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MACSSLPENV LSVQQKLIDE LVRGREIANQ LQTLLSQSLG DDWSVVNSAE YLVLRIMESF  60
TNTLFMLNGN NPDETVVFQI QATGSHVDSP CLDGWKISED SEKSCRTSVF TMKDTGVCYK  120
RRKTVYTWQR ETSTLTDDGH AWRKYGQKMI IKGKHPRHYY RCTNKYDQGC QATKQVQKIQ  180
ESPPIFRTTY CGHHICRNLL RAPELVFDST SPNQDSSLLL SFKDSNNLKN FTPQQAHHFN  240
FSSFTSVKDD VTDASNNNMM VSGRSNRSSS SDYIVTPDQF CLTDHGHDDE LITAFNQSPG  300
QYMTALSPNL DFDIQWDLMS GVMSFDDGDV F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-19137197969OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010093540.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010093540.10.0probable WRKY transcription factor 70
TrEMBLW9QU510.0W9QU51_9ROSA; Putative WRKY transcription factor 70
STRINGXP_010093540.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-34WRKY DNA-binding protein 70