PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010092861.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GRF
Protein Properties Length: 426aa    MW: 46769.2 Da    PI: 10.2748
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010092861.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC76.52.8e-24103147145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     ++ep+rCrRtDGKkWRCs++v++g+k+CErH+hrgr+rsrk +e+
  XP_010092861.1 103 EPEPMRCRRTDGKKWRCSKKVVAGEKYCERHMHRGRQRSRKLVEA 147
                     69****************************************997 PP
2WRC60.92e-19311353345
             WRC   3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     e grCrRtDGKkWRC+r+v++++k+C  H+hrg ++  k++e+
  XP_010092861.1 311 ELGRCRRTDGKKWRCRRDVIPDQKYCACHMHRGAKKLAKPFEP 353
                     679******************************9998888775 PP
3QLQ32.42.9e-124175236
             QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                     FT +Qlq++ +Q l+ +++aa++PvP +L+ +i+
  XP_010092861.1 41 VFTITQLQEFQQQTLIHRHIAAGLPVPLHLVIPIW 75
                    59********************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5166616.1514176IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088804.1E-84275IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.12103147IPR014977WRC domain
PfamPF088791.1E-20104146IPR014977WRC domain
PROSITE profilePS5166721.757309353IPR014977WRC domain
PfamPF088795.2E-17312351IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MRVCVCCEGG RGLGKKEWTA VMHGEKISKL KEESCPLIKP VFTITQLQEF QQQTLIHRHI  60
AAGLPVPLHL VIPIWESVAY SLGTSDFVRG FSSQGFDYRH MMEPEPMRCR RTDGKKWRCS  120
KKVVAGEKYC ERHMHRGRQR SRKLVEASSG IASPSNPTTT RPEKSKTESV QNPSSNLLGL  180
QLMTPSTDVT NVSHGGTTIT SNLSKKRVTY VTSPYIATNI TRGSGVITSV MATNNSNPVL  240
SSTKSNQNVG NHMNEMYFGN TSTIKGSSNN NKNISVGRTM SPGLGFSPKS VLQVVRRNDL  300
CIDKRNGTEL ELGRCRRTDG KKWRCRRDVI PDQKYCACHM HRGAKKLAKP FEPTASSAVT  360
NTAPLPPATA TSCRTDRTSP NTNLSISIPV SPYPISNDEK SDSGNSSDTT ISDTSISAYA  420
ISKVPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010092861.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010092861.20.0growth-regulating factor 9
TrEMBLW9RE940.0W9RE94_9ROSA; Uncharacterized protein
STRINGXP_010092861.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF92282022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.18e-30growth-regulating factor 2