PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009795221.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 436aa MW: 46418.1 Da PI: 9.9254

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009795221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3.1e-15	358	410	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ + XP_009795221.1 358 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELRKKQAEMMEMQK 410 79****************************************99888888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.1E-13	354	418	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.53	356	407	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.04E-29	358	410	No hit	No description
Pfam	PF00170	4.4E-13	358	410	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-11	358	408	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.6E-14	358	408	No hit	No description
PROSITE pattern	PS00036	0	361	376	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence Send to blast
MGSNLNIKNY GNEPPGESGS GGAGVPLVRQ SSVYSLTFDE FLRGSGKDFG SMNMDELLKN 60 IWSAEESQNM GTSGVGGQEV GVPGGNLQRQ GSLTLPRTLS QKTVDEVWRD MSKEYCSGKD 120 GNGDVGLSNM PRRQQTLGEM TLEDFLVRAG VVREDAQLAA KASNVGVFGD MSHAGHSLGV 180 GFGYQQSNGN TAMVASRNID NNSGIGVQSG NLPLNVNGII SVQQQQGTMQ LQQQPQQQQQ 240 QQQQPLFPKQ PGLAYGAPMA IPTSGQLGSP GMRGGIVGIS DPALGSSLVQ TAALTGGGMN 300 MVGFGAGGVT GATGSPAVSS DGLGKSNGDT SSISPVPYVF SGGLRGRKGG AVEKVVERRQ 360 RRMIKNRESA ARSRARKQAY TMELEAEVAK LKEENEELRK KQAEMMEMQK NRVQEMMNLQ 420 RGAKRRCLRR TQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence Send to blast

MGSNLNIKNY GNEPPGESGS GGAGVPLVRQ SSVYSLTFDE FLRGSGKDFG SMNMDELLKN  60
IWSAEESQNM GTSGVGGQEV GVPGGNLQRQ GSLTLPRTLS QKTVDEVWRD MSKEYCSGKD  120
GNGDVGLSNM PRRQQTLGEM TLEDFLVRAG VVREDAQLAA KASNVGVFGD MSHAGHSLGV  180
GFGYQQSNGN TAMVASRNID NNSGIGVQSG NLPLNVNGII SVQQQQGTMQ LQQQPQQQQQ  240
QQQQPLFPKQ PGLAYGAPMA IPTSGQLGSP GMRGGIVGIS DPALGSSLVQ TAALTGGGMN  300
MVGFGAGGVT GATGSPAVSS DGLGKSNGDT SSISPVPYVF SGGLRGRKGG AVEKVVERRQ  360
RRMIKNRESA ARSRARKQAY TMELEAEVAK LKEENEELRK KQAEMMEMQK NRVQEMMNLQ  420
RGAKRRCLRR TQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795221.1	0.0	PREDICTED: bZIP transcription factor TRAB1-like
Swissprot	Q9M7Q4	1e-127	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U7XZY9	0.0	A0A1U7XZY9_NICSY; bZIP transcription factor TRAB1-like
STRING	XP_009795221.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-108	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]