PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009626969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 467aa MW: 52459.1 Da PI: 6.9901 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.4e-11 | 173 | 213 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka+i++Le + ++Le+e XP_009626969.1 173 HKTLRRLAQNREAARKSRLRKKAYIQQLESsrvRLAQLEQE 213 5889************************9732344555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-7 | 170 | 249 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.0E-8 | 171 | 216 | No hit | No description |
PROSITE profile | PS50217 | 9.209 | 172 | 216 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.55E-21 | 174 | 226 | No hit | No description |
SuperFamily | SSF57959 | 3.31E-7 | 174 | 216 | No hit | No description |
Pfam | PF00170 | 5.4E-8 | 174 | 213 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 177 | 192 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.9E-29 | 265 | 340 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence Send to blast |
MGLESDNQIS FGSDHQQHLL FHNSQHQISF GMLQQSSSTS SVIPGNFISK DINTGGANYD 60 LGELDQAFFL YLDGQDPSSN HLRENNSEMR PPTLNIFPSQ PMHVEPSSTK ANTGLVSSGS 120 QKSSQPSIME LTNSKNDVLS AASGPEPKVA KREWNRKGLN SGSEKDAPKI PDHKTLRRLA 180 QNREAARKSR LRKKAYIQQL ESSRVRLAQL EQELQRARSQ GFHFGGNALL GGDQTLPVNR 240 GSMSSDAAVF DMEYARWVEE HHRLICELRS AVVEEHLPEN ELRMYVDNCL THYDQIMNLK 300 SMLAKSDVFH LVSGMWKTPA ERCSIWMGDF RPSELIKIIL SQIEPLTEEQ FVGICGLQQS 360 TQEAESALSL GLEALNQSLS DTIVSDALAN CPQNMANYMG QMALAINKLS TLEGFFRQAE 420 NLRHQTIHRL HQILTSRQAA RCFLAIAEYF HRLRALSSLW VARPRQE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009626969.1 | 0.0 | PREDICTED: transcription factor TGA2.3-like | ||||
Refseq | XP_018633584.1 | 0.0 | PREDICTED: transcription factor TGA2.3-like | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A1S4BYY0 | 0.0 | A0A1S4BYY0_TOBAC; transcription factor HBP-1b(C38)-like | ||||
STRING | XP_009626969.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-174 | bZIP family protein |