PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009602357.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 113aa    MW: 13031.9 Da    PI: 10.5183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009602357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-19121123102
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     +G+rFhPtd el+ ++Lk+ ++g++l+ e  ++++diy    Pw++  +  ++eek  yfF++ +k++++ +r +r+ ++g+Wk +    ++++ 
  XP_009602357.1  12 MGVRFHPTDAELI-NFLKRFLKGETLSSEYPFQHADIYGDrPPWEIFgADSNSEEKVRYFFTRLKKQKSEHTRVHRTCANGTWKCQTGIVPITNG 105
                     7************.9**********999778*******87478***755666677788**************************88888999998 PP

             NAM  96 kgelvgl 102
                     kg++vg 
  XP_009602357.1 106 KGTVVGF 112
                     8887776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.17410113IPR003441NAC domain
SuperFamilySSF1019412.75E-1710113IPR003441NAC domain
PfamPF023651.2E-91296IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MSTLPAARRR IMGVRFHPTD AELINFLKRF LKGETLSSEY PFQHADIYGD RPPWEIFGAD  60
SNSEEKVRYF FTRLKKQKSE HTRVHRTCAN GTWKCQTGIV PITNGKGTVV GFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532580.0EU753258.1 Nicotiana tabacum NAC transcription factor (NAC1) mRNA, complete cds.
GenBankEU7532610.0EU753261.1 Nicotiana tabacum NAC transcription factor (NAC4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602357.12e-81PREDICTED: transcription factor JUNGBRUNNEN 1-like, partial
TrEMBLB3VK704e-76B3VK70_TOBAC; NAC transcription factor
TrEMBLB3VK732e-76B3VK73_TOBAC; NAC transcription factor
STRINGXP_009602357.17e-81(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-09NAC-domain protein 101