PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008220547.2
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 364aa    MW: 41140.3 Da    PI: 9.5943
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008220547.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-05132155123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ Cg+ F+ +++L +H+ t H
  XP_008220547.2 132 FPCTACGEIFPKPETLDNHQATrH 155
                     89******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.66132160IPR007087Zinc finger, C2H2
PROSITE patternPS000280134155IPR007087Zinc finger, C2H2
SuperFamilySSF563991.21E-6157283No hitNo description
Gene3DG3DSA:3.90.228.103.1E-5169274IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MANISTLFHK FLSLFILLLH LGCFTFTTNN HHPPTKKHKL SSLLSKPTLK PQKALTASWS  60
YLKRIFTSPR TCKITCTNII QSHLSTPPRS SHHSIVSLVQ PDPDSKYPSD SFPESDISAA  120
SHPFFPLRND IFPCTACGEI FPKPETLDNH QATRHAVSEL IDGDSGKNIV RIIFKTGWTD  180
TRKAPEIRRI LKIHNSEKIL SRFEEYREAV KCKAVRNGAV RRRDERCIAD GNELLRFHCS  240
TFVCDLGLNG NSGICNREYC SVCGIIKSGF SPKLDGISTL SSSSRAHVAI PEDIEEEFEF  300
MNVKLFDGSW RVGSGVTRRR ICMTWTRRAA GLTRWWGEEG VGPTRGWMRR SSWCLIRGLC  360
FLAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008220547.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008220547.20.0PREDICTED: uncharacterized protein LOC103320614
TrEMBLA0A314UCJ10.0A0A314UCJ1_PRUYE; Uncharacterized protein
STRINGXP_008220547.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106682936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-83C2H2 family protein