PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004513314.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family C2H2
Protein Properties Length: 252aa    MW: 28702.6 Da    PI: 8.8552
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004513314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.0003394116223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+++++++ +L  H +  H
  XP_004513314.1  94 SCSVCSRVYPTSRLLSIHVSEaH 116
                     6*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.816691IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806891IPR007087Zinc finger, C2H2
SMARTSM003555.493116IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028095116IPR007087Zinc finger, C2H2
SMARTSM003550.025131156IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280133156IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MMDVEKQNLN SEFPFWKPIS RRFQPDSLFF APGNVERELL VKQVALELTE EKEQLENLIQ  60
EDGREVFCPI VGCGVCLPSM EDFENHYNAR HTASCSVCSR VYPTSRLLSI HVSEAHDSFF  120
QAKVARGYDM YECLVEGCGL KFKSYKSRQQ HLVDKHKFPT SFEFYKKALP SKKHRLKSQR  180
KQSTHKEDTS GMMEVENAAI DDLVSAVSRL NTSDSTPSSI SFGRRHTKGL SFVPRVVQRG  240
RGSNSGSSIP KR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004513314.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004513314.10.0zinc finger protein 511
TrEMBLA0A1S2Z1H70.0A0A1S2Z1H7_CICAR; zinc finger protein 511
STRINGXP_004513314.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97182430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.11e-112zinc ion binding;nucleic acid binding;zinc ion binding