PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004507429.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family FAR1
Protein Properties Length: 261aa    MW: 29648.4 Da    PI: 6.1127
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004507429.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.27.6e-3098185291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA+e+GF +r+sk ++s+r+g+ + r fvC+keg+r ++k++  k  r+raetr+gC+a+++v+k+++gkw++tk+++eH H+l+p
  XP_004507429.2  98 FYNAYATEAGFIIRVSKLSRSRRDGTAIGRAFVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMIMVRKMNSGKWVITKFVKEHAHPLNP 185
                     ******************************************9988..9**************************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.6E-2798185IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MVDEAPSNKA TASELPFAVI VIISIVEFGI DDSFNGDTVK NVVMAEAEPT YQQDHDNTTQ  60
DSSRLLTIPS ADPTVPDTAV DEPYVGQEFE SEAAAHAFYN AYATEAGFII RVSKLSRSRR  120
DGTAIGRAFV CNKEGYRMPD KREKIVRQRA ETRVGCRAMI MVRKMNSGKW VITKFVKEHA  180
HPLNPGSGRR DCFYEQCPNE HDKIRELSQQ LAIEKKRSVT YKRQLELIFD YIEEHNVSLS  240
KKIQHIVDSV KEIEPKEEDN H
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004507429.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027926454.11e-131protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A392MNA01e-142A0A392MNA0_9FABA; Protein FAR1-RELATED SEQUENCE 6-like (Fragment)
STRINGXP_004507429.11e-161(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.23e-89FAR1 family protein