PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004501381.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family WRKY
Protein Properties Length: 294aa    MW: 33121.8 Da    PI: 7.1507
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004501381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.32.1e-30139197259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs edp+++++tYegeHnh 
  XP_004501381.1 139 RDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDPSILVTTYEGEHNHG 197
                     7***************************99****************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.0E-29137198IPR003657WRKY domain
SuperFamilySSF1182902.35E-25137198IPR003657WRKY domain
SMARTSM007743.1E-35138198IPR003657WRKY domain
PfamPF031069.7E-25140196IPR003657WRKY domain
PROSITE profilePS5081125.58140199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0002238Biological Processresponse to molecule of fungal origin
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009623Biological Processresponse to parasitic fungus
GO:0009651Biological Processresponse to salt stress
GO:0009685Biological Processgibberellin metabolic process
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0009938Biological Processnegative regulation of gibberellic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0031347Biological Processregulation of defense response
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:1990841Molecular Functionpromoter-specific chromatin binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MEPTCVDTSL NLNVIPSRDT EVTAEKVLVE ELERLNHENK ILTESLNHMC NNYVVLQKHL  60
SRFNQPSDTN FENEIVTQSR KRKAGSIENC VNQFGTNSIV ECSTTTTEET FKRTTHNSSP  120
KISKVLVWTD ASNTGLYVRD GYQWRKYGQK VTRDNPSPRA YFKCSFAPSC PVKKKVQRSV  180
EDPSILVTTY EGEHNHGQQQ TEISLTSSNQ SESTPTYSNL VPSSSVHSIR NNDLGTPPVS  240
TLDLVNYTEN QKSSIQQFLV QQMATSLTND PNFTAALVTA ISGRFMDRTS QEKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-201381961471WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004501381.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004501381.10.0probable WRKY transcription factor 40
TrEMBLA0A1S2Y9370.0A0A1S2Y937_CICAR; probable WRKY transcription factor 40
STRINGXP_004501381.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-68WRKY DNA-binding protein 40