PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022213-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 360aa    MW: 40245.5 Da    PI: 5.8438
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022213-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.63e-29132192259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+r++edp+v+eitY+g+H ++
  WALNUT_00022213-RA 132 DDGYSWRKYGQKDILGAKYPRSYYRCTFRltqNCWATKQVQRADEDPNVFEITYRGRHICS 192
                         8**************************99999**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-28123192IPR003657WRKY domain
PROSITE profilePS5081122.32126189IPR003657WRKY domain
SuperFamilySSF1182902.35E-25130192IPR003657WRKY domain
SMARTSM007748.2E-39131193IPR003657WRKY domain
PfamPF031067.0E-26132191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEKSWSWEQK TLVSELIQGM EMAKQLRVQF SANSSSETTE TLLHRILASY EKALMILRWS  60
GSMGQTQTAA GVTTGVPGSP ISVDGSFGSN EFDKGLKDHR DLNDVSKKRK IMPRWTDQVR  120
VSSETGLEGP HDDGYSWRKY GQKDILGAKY PRSYYRCTFR LTQNCWATKQ VQRADEDPNV  180
FEITYRGRHI CSHATNLVPA PSSPEKQEQK QNFNNNDNQQ DQRPLDILGN IGSSLRIVTE  240
ELENKEMSYP FSFPSTSFGC TKSENSNFSL STLDNNTSFL GSFSPPFLSP ATPESNFHSV  300
SPFQNSNFKG AHNGHRSESD LTEIISANTS ATSSPILDLD FSLDPAEIGH FPFDSSAFFA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-181331891874Disease resistance protein RRS1
5w3x_D2e-181331891874Disease resistance protein RRS1
6ir8_A1e-18132191968OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018846394.10.0PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A2I4GR660.0A0A2I4GR66_JUGRE; probable WRKY transcription factor 41
STRINGPOPTR_0003s13840.11e-152(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.17e-67WRKY family protein