PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00015519-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family TALE
Protein Properties Length: 722aa    MW: 78843.1 Da    PI: 7.1482
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00015519-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.7e-094194512254
                         SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         ++yp+ +++  LAk++gLt +qV++WF N R +
  WALNUT_00015519-RA 419 HPYPKDSDKILLAKQTGLTRSQVSNWFINARVR 451
                         89*****************************88 PP
2BELL122.71.5e-39278349172
                BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         +rqelq+kkakL+++l+eV++rY+qy++q+q+v+ssFe++aglgsa++Yt+lAl++iS++FrcLkdai++qi
  WALNUT_00015519-RA 278 QRQELQMKKAKLVNMLDEVEQRYRQYYHQMQIVVSSFEQAAGLGSARSYTALALQTISKQFRCLKDAISSQI 349
                         69*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.1E-61206347IPR006563POX domain
PfamPF075265.6E-48211346IPR006563POX domain
PROSITE profilePS5007111.823392455IPR001356Homeobox domain
CDDcd000862.89E-12395456No hitNo description
SMARTSM003892.0E-9395459IPR001356Homeobox domain
SuperFamilySSF466898.13E-17396462IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-28398461IPR009057Homeodomain-like
PfamPF059202.1E-17412451IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    Send to blast
MATYFHGRSE FQAAADGLQT LYLMNPNYVP YSDTQDHHHP AANMLLLNPA GNALNSATLS  60
HAPPPSQHFV GIPLIPTNNS EDPNRPSMLA PQEISALHGI ATSRVHYNLW GPVDHAASVT  120
AASSSGGGVD VASQMGFGGP TQQGLSLSLS SQQTAAYNRS LSGTEARDHV AARHAHVQGI  180
SPTSGEDLRA SGNSPSSVSA VSNGIPGMQS VVLGSKFLKA VQEVLDEVVN VGKGMKVASL  240
LEGTKEKMKM NNEPTDAIQD IGHGESSSKQ AAELTTAQRQ ELQMKKAKLV NMLDEVEQRY  300
RQYYHQMQIV VSSFEQAAGL GSARSYTALA LQTISKQFRC LKDAISSQIK ATNKSLGEED  360
CLGAKAEGSR LRYVDQQLRQ QRALQQMGMF QHNAWRPQRG LPERAVSVLR AWLFDHFLHP  420
YPKDSDKILL AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YSEEIKEQEQ SSPQDNITNK  480
RESNKESGSK TISPQESAAI RIDQTKGLQS KPETFTNPSF CSTEISNSSM STSPMGGSIQ  540
TQSAINLIGS SNMQRSPKKP RNSDMENSPD RIFSMDMAMK PDETSTDNIS TKFGTERAQT  600
KDGYLFFSGT TGSDGGGFST YPMGDFGRFN PEQLAPKFQG NGVSLTLGLP HCENLSLAGT  660
GQHSYLSHHN IPMGSRLEMG TAETEFCVIN PPQHSHSNDG YQNIDIQNRK RFAAQLLPDF  720
VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A1e-15401459563Homeobox protein Meis2
3k2a_B1e-15401459563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018817027.10.0PREDICTED: BEL1-like homeodomain protein 1
RefseqXP_018817028.10.0PREDICTED: BEL1-like homeodomain protein 1
TrEMBLA0A2I4ECA70.0A0A2I4ECA7_JUGRE; BEL1-like homeodomain protein 1
STRINGVIT_06s0009g00410.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-123BEL1-like homeodomain 1