PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014012-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family C2H2
Protein Properties Length: 262aa    MW: 28937.1 Da    PI: 9.1881
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014012-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00058196218223
                         EETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                         +Cp Cg  Fs+   L+ H  + H
  WALNUT_00014012-RA 196 ECPQCGAKFSSVTALVEHVEKvH 218
                         5*****************99888 PP
2zf-C2H216.81.9e-05234256223
                         EETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                         +Cp+C++ F+++ +L+ H  + H
  WALNUT_00014012-RA 234 VCPKCSRGFRDPVSLVEHVERdH 256
                         7*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1110.101.5E-1060119IPR000058Zinc finger, AN1-type
SuperFamilySSF1183107.98E-962112No hitNo description
PfamPF014282.8E-770110IPR000058Zinc finger, AN1-type
SMARTSM003550.01195218IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.494195223IPR007087Zinc finger, C2H2
PfamPF138944.5E-4196218No hitNo description
PROSITE patternPS000280197218IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.1E-4199218IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003556.8233256IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.58233260IPR007087Zinc finger, C2H2
PROSITE patternPS000280235256IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MPVFCLEHRS YIKHSCPKAD RQDVTVVICP LCAKGVRLIP QEDPNISWET LVNIECDPSN  60
YEKVTKKKKC PVPACREVLT FSNTIKCRDC LVDHCLKHRF GPDHKCSGPK KSEAGFPFMG  120
LLNRSRTENS KPNRAPTSSS SKWTSNFLNA ASTVRASAEA GMAKLSTEIS QKWQIAKDGI  180
GQSSNSSRVG GIGQEECPQC GAKFSSVTAL VEHVEKVHER SGRRGGMKKV SIDVCPKCSR  240
GFRDPVSLVE HVERDHGRTP RA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018838804.10.0PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like
SwissprotQ8VZ421e-105SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A2I4G4H50.0A0A2I4G4H5_JUGRE; zinc finger AN1 and C2H2 domain-containing stress-associated protein 11-like
STRINGXP_010102532.11e-156(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-107C2H2 family protein