PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00013184-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Trihelix
Protein Properties Length: 453aa    MW: 51599.6 Da    PI: 5.243
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00013184-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix72.38.7e-23122218185
            trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstc 79 
                         +Wt++ v++Li++++ ++++   +            +kk++W+ vsk m+++g+++sp+qC++k+++lnkryk+++++ +++ +++++++ 
  WALNUT_00013184-RA 122 KWTDDVVRLLIAVVSCVGDDGTLEGgeglkrksgilQKKGKWKTVSKIMMSKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGtSCRVVENP 212
                         7**************666665532113455566888**********************************************569999999 PP

            trihelix  80 pyfdql 85 
                         ++ d++
  WALNUT_00013184-RA 213 ALMDSM 218
                         888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.3E-19120245No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MDSSGLGGGF MSSPNGAILD LESSIHRHQQ TQLGHPSLRH QHHMNLMSGL ESDHHPPVGL  60
MEEKGTVMKC MSMNFSKGKA IAPANAPNSN NMSEEDEPSF TEDGYGDNVD GGKRGSPWQR  120
MKWTDDVVRL LIAVVSCVGD DGTLEGGEGL KRKSGILQKK GKWKTVSKIM MSKGCHVSPQ  180
QCEDKFNDLN KRYKRLNDIL GRGTSCRVVE NPALMDSMPQ LSAKAKDDVK KILSSKHLFY  240
KEMCAYHNGQ RIPNCEDLDL QGHSLPLGRC SKDNTGSEEE AEENNDSEDD EIDNDDDNNA  300
EGDVERMGEF SGREKVSEED GHFWSQSVAL DNFEAEIAEI FEDPTKSLWE RREWIKRQML  360
QLEEQRVNFQ AEAFELEKQR FKWLRYCSKK DRELERLRLE NERMKLENER SVLQLRQKEL  420
EIDLRRSEAS IGPTSVGIDR LQGRDHIDLS RRQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018830974.10.0PREDICTED: uncharacterized protein LOC108998738
TrEMBLA0A2I4FH560.0A0A2I4FH56_JUGRE; uncharacterized protein LOC108998738
STRINGXP_010102326.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105463240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.14e-78sequence-specific DNA binding transcription factors