PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00010304-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 359aa    MW: 40140.4 Da    PI: 6.0484
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00010304-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.75.7e-29125186159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +dDgy+WrKYGqKe+ g+ fpr+YYrCt++   gC ++k+v+rs+ dp+++e+ Y+g+H+++
  WALNUT_00010304-RA 125 VDDGYSWRKYGQKEILGASFPRGYYRCTHRnaqGCLATKQVQRSDGDPTIFEVNYRGRHTCS 186
                         59***************************98899**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-28114187IPR003657WRKY domain
PROSITE profilePS5081122.768120183IPR003657WRKY domain
SuperFamilySSF1182902.09E-25124187IPR003657WRKY domain
SMARTSM007741.3E-40125187IPR003657WRKY domain
PfamPF031063.4E-26126185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    Send to blast
MEKTVLDCEQ KTLIGELNQG MELAKQLMNH IHHSSSHEAR EVLIGKILSS YEKALSALNW  60
GAFVGQTKPI VSKTESPSHF GNSSPRSEGS DPEYKHREVY KKRKTLPKWT EQVKVVSGTG  120
LEGPVDDGYS WRKYGQKEIL GASFPRGYYR CTHRNAQGCL ATKQVQRSDG DPTIFEVNYR  180
GRHTCSQSSR FNMAPSSRST SEGLKENRNT CHPKQQPHEE EKPPQEIVSE FGAGHLVKAE  240
ELENGEDDKF PIFSFPSTPI ESENADDNIF FESSMLNSHF IGSLSPTFIS PATSESNIFC  300
MSPCHINSHG LCHNLHTSES DHTDIISAPT SAANSPIGNF DFSLDLDPYF QFDNPEFFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-18125185868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018827943.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLA0A2I4F8G70.0A0A2I4F8G7_JUGRE; probable WRKY transcription factor 53
STRINGEOX957531e-135(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-55WRKY family protein