PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00002903-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 303aa    MW: 34015.8 Da    PI: 8.1183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00002903-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15e-101555340
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
              bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40
                        + k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+
  WALNUT_00002903-RA 15 DQKTLRRLAQNREAARKSRLRKKAYVQQLENsrlRLAQLEQ 55
                        56889*************************83334444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0021366IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.371559IPR004827Basic-leucine zipper domain
PfamPF001704.9E-71656IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-61761No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-71956No hitNo description
PROSITE patternPS0003602035IPR004827Basic-leucine zipper domain
PfamPF141442.9E-30102175IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MVVDSVDQSK AKAADQKTLR RLAQNREAAR KSRLRKKAYV QQLENSRLRL AQLEQELQRT  60
RQQGAFSATG YSGDHIHSIN GNGSLAFDMD YARWLDEHNR LINDLRLALN SHMGDNELDV  120
LVDGVMVHYD EIFRLKSIGA KADVFHMLSG MWKTPAERCF MWLGGFRSSE LLKILGNHLE  180
PLTEQQLMGI CNLQQSSQQA EDALSQGMEA LQQSLVETLS STSLGSGGSG NVADYMGQMA  240
IAMGKLATLE NFLHQADLLR QQTLQQMHRI LTTRQAACAL LVISDYISRV RALSSLWLAR  300
PRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018811819.10.0PREDICTED: transcription factor PERIANTHIA-like isoform X1
SwissprotQ5Z6N91e-164TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A2I4DXE20.0A0A2I4DXE2_JUGRE; transcription factor PERIANTHIA-like isoform X1
STRINGVIT_01s0011g03230.t010.0(Vitis vinifera)
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60223149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-145bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]