PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi03g04430.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 580aa    MW: 64769.8 Da    PI: 6.4032
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi03g04430.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-10216277162
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      eke +r rr   NRe+Ar   +R++a +eeL++k+++L  eN++Lkk +  lk ++++  s+
  Vradi03g04430.1 216 EKEARRMRRILANRESARQTIRRRQALCEELTKKAATLVVENESLKKWMFYLKIHISSTLSD 277
                      7999******************************************9888888777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.1E-6212262No hitNo description
SMARTSM003389.5E-8216280IPR004827Basic-leucine zipper domain
PfamPF001703.1E-9216276IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-5220266No hitNo description
CDDcd147025.59E-12221262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MDAESEKRAF TSTSVSRSSS FEGMDRLVDK EEMEAAETLA QLAMRDSHST DKWCTKLCAI  60
PEVHPSPTLH SDPSLGTADQ AIADQQQDEK VHATASVEAE RTQQNNCSEP MEVEQDANLI  120
PNSSHTEVEQ EANLIHNSSH TEVEQDANLI HNSSHTEVEQ DANLIHNSSH TEVEVEQAQD  180
SNVAHKPKEQ DSNVTHKSNN LLGRYNRSRK NLTEEEKEAR RMRRILANRE SARQTIRRRQ  240
ALCEELTKKA ATLVVENESL KKWMFYLKIH ISSTLSDKKE KDLALKEYQS LETTNKKYIN  300
PGKSMSSSIL QIAKSTNTEE EKTPVEPESS VAEVTPSSGS GPWFLYNHFP VQHVFWPSPL  360
QPTYPVHLPN ASFNSIIIPS IANVPCSSES ELYHKQNNLI NDKQTPNPYY MFPCPWIFPC  420
PQFGNGQSSP SCSLKDKQDN LSLGKPCSSS SSLNTLANVD YRAWTEARLG NDPSRFSLDG  480
GEKKTECHII ENNHGPSLGC NGHACAFEQE NELQLHSGPN NKASSTAYIG ASSVEKKQKQ  540
FICQGKSLAD AVAAAEARKR RKELTKQKSI HNRQSRMQC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1557562RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi03g04430.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014495593.10.0uncharacterized protein LOC106757437
TrEMBLA0A1S3TP730.0A0A1S3TP73_VIGRR; uncharacterized protein LOC106757437
STRINGXP_007162879.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-30bZIP family protein