PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_5DL_B2A650E66.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 285aa MW: 31186.3 Da PI: 9.9697 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 103.4 | 3e-32 | 2 | 80 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ ++elvg+kktLvfykgrap+gek++Wvmheyrl Traes_5DL_B2A650E66.1 2 GEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFTGqppsTQELVGMKKTLVFYKGRAPRGEKSNWVMHEYRL 80 578*************************************9888888888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 41.31 | 1 | 101 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.11E-37 | 2 | 101 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-15 | 6 | 80 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
MGEKEWYFFS LRDRKYPTGV RTNRATNAGY WKTTGKDKEI FTGQPPSTQE LVGMKKTLVF 60 YKGRAPRGEK SNWVMHEYRL HLKPASKSNK DEWVVCRIFA KSPGVKKYPS STNAHSRSHH 120 HPYTLDMVPQ FLPTLLGHDL FGGGRGHHHP YMTPADLAEL SRFARGTPGL HPHIQPHPAA 180 AGYLNPPGPF TLSSLNLNLG GPSPQHVLHH AMPMPMGQQQ QQAGGANGQA MTMEQHMAAG 240 LGGIPAAGGD GGGFGGEGHA AGGAGMRYQN LDVDQMVERY WPGSY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-32 | 1 | 107 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-32 | 1 | 107 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-32 | 1 | 107 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-32 | 1 | 107 | 68 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-32 | 1 | 107 | 71 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-32 | 1 | 107 | 68 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-32 | 1 | 107 | 68 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020186546.1 | 0.0 | NAC domain-containing protein 92-like | ||||
TrEMBL | A0A453L5Z1 | 0.0 | A0A453L5Z1_AEGTS; Uncharacterized protein | ||||
STRING | Traes_5DL_B2A650E66.1 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9361 | 38 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 3e-54 | NAC domain containing protein 38 |
Publications ? help Back to Top | |||
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