PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA36978
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 379aa    MW: 42058.2 Da    PI: 8.9437
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA36978genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.3e-1197132540
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                                k  rr+++NReAAr+sR+RKka++++Le+   +L +
  Tp57577_TGAC_v2_mRNA36978  97 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQ 132
                                7789************************85544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.8E-991139No hitNo description
SMARTSM003388.4E-593146IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.19795139IPR004827Basic-leucine zipper domain
CDDcd147087.49E-2397144No hitNo description
PfamPF001702.5E-897135IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.81E-797139No hitNo description
PROSITE patternPS000360100115IPR004827Basic-leucine zipper domain
PfamPF141441.2E-30219293IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
NSSSSSGMRP PPTLNIFPSQ PMHVAPPPPS NSKGSMGLTS PQSSGSKKAS QPSMELANQR  60
NETLSAPAPP KLVKRENSRK GTTSSSEHEG PKTPDPKTLR RLAQNREAAR KSRLRKKAYV  120
QQLETSRIKL NQLEQELQRA RTQGVLMGGG ALMGGDQGGI PISMNSISSG IYLPILIKST  180
HKIYNFFVFA LKLFATKFSE AAMFDVEYGR WLEEHHRLVC ELRAAVDEHL HENELRLYVE  240
NCLAHYDQVI NLKAILARTD VFHLVYGMWK TPAERCFMWI GGFRPSELIK IIISQIEPLT  300
EQQILGICGL QQSTQEAEEA LSQGLDALNQ SLSETITSDS LSCPPNMANY MGQMALAMNK  360
LSTLESFVRQ VCYITSFY*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA36978
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024630289.10.0bZIP transcription factor TGA10
SwissprotQ52MZ21e-175TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A072THF30.0A0A072THF3_MEDTR; BZIP family transcription factor
TrEMBLA0A396JP800.0A0A396JP80_MEDTR; Putative transcription factor bZIP family
STRINGXP_004497935.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-135bZIP family protein