PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA19504
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family EIL
Protein Properties Length: 647aa    MW: 72674.5 Da    PI: 6.4018
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA19504genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3428.37.6e-131383861323
                                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                                e+l++rmwkd+++lkrlke++k   e+++a ++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv
  Tp57577_TGAC_v2_mRNA19504  38 EDLERRMWKDRIKLKRLKEKQKL--EARQA-AEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPV 118
                                89***************999985..55776.99*************************************************** PP

                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
                       EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                                +g+sd++raWWkekv+fdrngpaai+ky+a++l++ +++++  ++ + +++l++lqD+tlgSLLs+lmqhcdppqr++plekgv
  Tp57577_TGAC_v2_mRNA19504 119 SGSSDNIRAWWKEKVKFDRNGPAAIAKYEAECLAMIEADNN--RNGNPQSMLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGV 200
                                **********************************9988888..6799999********************************** PP

                                HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
                       EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
                                +pPWWPtG+e+ww +l l++ qg ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes ++l vl++
  Tp57577_TGAC_v2_mRNA19504 201 PPPWWPTGNEDWWLHLNLPHGQG-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESSIWLGVLSR 283
                                ***********************.9*********************************************************** PP

                                TTT-S--XXXXXX.............XXXXXXXXXXXXXXXXXXXX.....XXXXXX.XXXXXXXXXX................ CS
                       EIN3 253 eekecatvsahss.............slrkqspkvtlsceqkedve.....gkkeskikhvqavktta................ 302
                                ee+++++ s+++              +    +++   s+ +++dve     ++++   + ++++++ +                
  Tp57577_TGAC_v2_mRNA19504 284 EEALIRQPSSDNGtsgitempvgipiE----NKQPGTSSASNYDVEnydvdVTDDGVGSVSSKEDRSNqfmdaepsdnlrrssv 363
                                ***********4445677777766331....33333333334444444444444444454444444445777777777887777 PP

                                ...XXXXXXXXXXXXXXXXXXXXX CS
                       EIN3 303 ...gfpvvrkrkkkpsesakvssk 323
                                   +  +++ rkk+p++++k+ +k
  Tp57577_TGAC_v2_mRNA19504 364 kdtD-RAQKPRKKRPRSRSKAANK 386
                                7532.2222233344444444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.7E-12638285No hitNo description
Gene3DG3DSA:1.10.3180.108.9E-71161293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.62E-61166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    Send to blast
MAEIEEIGPD VCSDLDVDDI RDQNIPEKDV SDEDIEPEDL ERRMWKDRIK LKRLKEKQKL  60
EARQAAEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVKFDRNGP AAIAKYEAEC LAMIEADNNR NGNPQSMLQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWLHLNLPH GQGPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKIRRHVR QSKCLQDKMT AKESSIWLGV LSREEALIRQ PSSDNGTSGI  300
TEMPVGIPIE NKQPGTSSAS NYDVENYDVD VTDDGVGSVS SKEDRSNQFM DAEPSDNLRR  360
SSVKDTDRAQ KPRKKRPRSR SKAANKLPAQ SDNEILNVEP ISKVPNINGR EAHVVGLLRI  420
HGNEQVNGTD SVLRLPERGH EVPVQLAAPE FDHYSYMHAN NVMSPESVYM SGRPLHYPHL  480
QNPXXXXXXX XXLQYRYGPS QDGPHQHLQP GPAANIEPGY GPSQDGPHQH LQPSPAANIE  540
PGYGPSQDGP HQHLLPSPVA NIEPIRQPEN AAITMPPAHM RGDEITRGDM NYFAKDAFQN  600
ELDRPIEPFF GSPISNMPFD FGGLNSPPFH LDDFLGDDEM IQYFGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A4e-721652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1370377KPRKKRPR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA19504
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004486935.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-170EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2K3PCR80.0A0A2K3PCR8_TRIPR; Ethylene insensitive 3-like 3 protein
STRINGXP_004486935.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-160ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]