PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp57577_TGAC_v2_mRNA1533 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
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Family | EIL | ||||||||
Protein Properties | Length: 236aa MW: 27154.1 Da PI: 6.6881 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 321.3 | 2.6e-98 | 25 | 234 | 1 | 217 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 eelkkrmwkd++ll+++ke++ ++ +e++++ak +e++rrkkmsraQD++LkYM k+m vc+a+GfvYgiipekgkpv+ Tp57577_TGAC_v2_mRNA1533 25 EELKKRMWKDKILLQKMKEKQDKN---NEPELQAK-----QEASRRKKMSRAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVS 101 8**************999999974...68877776.....7******************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT CS EIN3 86 gasdsLraWWkekvefdrngpaaisky....qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplek 166 g+sdsLr+WWk++++fd +p a++ky ++++ + ++++s+ h l++lqD+tlgSLLsalmqhc ppqrrfple+ Tp57577_TGAC_v2_mRNA1533 102 GSSDSLREWWKDQIRFDHSAPLAVAKYlpllEQDEQFN----TMMADPNSYIHLLQDLQDSTLGSLLSALMQHCVPPQRRFPLER 182 ***************************55543333332....2345799************************************ PP --HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHT CS EIN3 167 gvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhm 217 g++pPWWPtG e wwge+g ++++qg+ppykkphdlkkawkvsvL++vikh+ Tp57577_TGAC_v2_mRNA1533 183 GISPPWWPTGLENWWGEQGlTAQEQGPPPYKKPHDLKKAWKVSVLASVIKHV 234 *******************8899999*************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.7E-99 | 25 | 234 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.4E-46 | 147 | 234 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 6.93E-41 | 149 | 234 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MVVISDETEP YGEEEETETE SVDYEELKKR MWKDKILLQK MKEKQDKNNE PELQAKQEAS 60 RRKKMSRAQD SVLKYMAKIM DVCKAKGFVY GIIPEKGKPV SGSSDSLREW WKDQIRFDHS 120 APLAVAKYLP LLEQDEQFNT MMADPNSYIH LLQDLQDSTL GSLLSALMQH CVPPQRRFPL 180 ERGISPPWWP TGLENWWGEQ GLTAQEQGPP PYKKPHDLKK AWKVSVLASV IKHVT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-40 | 147 | 234 | 1 | 87 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-40 | 147 | 234 | 1 | 87 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp57577_TGAC_v2_mRNA1533 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC125389 | 0.0 | AC125389.33 Medicago truncatula clone mth2-12a18, complete sequence. | |||
GenBank | CR940309 | 0.0 | CR940309.6 M.truncatula DNA sequence from clone MTH2-10C20 on chromosome 3, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003601983.1 | 1e-149 | ETHYLENE INSENSITIVE 3-like 5 protein | ||||
Swissprot | Q9FJQ5 | 1e-100 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | A0A2K3MTY4 | 1e-170 | A0A2K3MTY4_TRIPR; Ethylene insensitive 3-like 4 protein | ||||
STRING | AES72234 | 1e-148 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65100.1 | 2e-99 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Tp57577_TGAC_v2_mRNA1533 |
Publications ? help Back to Top | |||
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