PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31687-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 149aa    MW: 17194.4 Da    PI: 6.5208
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31687-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00122244123
                     EEETTTTEEESSHHHHHHHHHHT CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                     y+C+ C+++F++      H+ +H
  TRIUR3_31687-P1 22 YTCSFCPRTFTNLQARGGHMTKH 44
                     9**********998877777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002802444IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MATGSHGSWR SNETPMIPSP VYTCSFCPRT FTNLQARGGH MTKHRQEVLE NRRKHEEYMT  60
KKAKEFSMEP LSPNTAYWRR YRKGKEKPEE IIFFPLQMSR ELSEDDGGSS NVPMPYGSVA  120
TNTSMMLNVE EKEIGDEEEN LNIDLTLKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM7ZDW91e-108M7ZDW9_TRIUA; Uncharacterized protein
STRINGTRIUR3_31687-P11e-109(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2080966
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-07zinc-finger protein 10