PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_30416-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 341aa    MW: 37048.3 Da    PI: 6.1842
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_30416-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY86.22.9e-27121181158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      +dDg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+r++edp +++++Y+geH++
  TRIUR3_30416-P1 121 VDDGHSWRKYGQKDILGAKHPRGYYRCTHRksqGCAATKQVQRADEDPALFDVIYHGEHTC 181
                      59***************************98899*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-27112182IPR003657WRKY domain
PROSITE profilePS5081122.251116179IPR003657WRKY domain
SuperFamilySSF1182909.02E-25120181IPR003657WRKY domain
SMARTSM007741.6E-39121183IPR003657WRKY domain
PfamPF031065.4E-27122181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MESVDENGGS RLVVTELGYI KELVRQLDVN LGGCPDHCKR LAAQIFAVAE RSIGMIRSGH  60
FDCRKRSAAG LDSPPFSATP SPLSDVSGVP FHANNKKRKT MEKRKHQVRV SSEGAGAEIP  120
VDDGHSWRKY GQKDILGAKH PRGYYRCTHR KSQGCAATKQ VQRADEDPAL FDVIYHGEHT  180
CVHKTVAAAA AMPAEENPDA RRHLQNLSTS LTVNTEGLTA TTGHQGCGTT TSFCFSSQAV  240
SALTTPQEHY PFSMPSTPEN CFGQGASLST SLEPSPVTSD SNRFSMNPFQ AEWRAQSEYD  300
EVVSALVAAG TMPALAMEME ENAFSMDGFE FDVSCFFASD D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-22121181868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3770660.0AK377066.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3147D20.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020200629.10.0WRKY transcription factor WRKY62-like
TrEMBLM7YJ560.0M7YJ56_TRIUA; Putative WRKY transcription factor 41
STRINGTRIUR3_30416-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP108638131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.21e-35WRKY family protein