PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_26781-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 20947.2 Da PI: 10.2137 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43 | 9.6e-14 | 133 | 178 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ N++L + TRIUR3_26781-P1 133 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKDLNQELVRKQA 178 79************************************98865443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-10 | 129 | 190 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.507 | 131 | 180 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.27E-24 | 133 | 185 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-13 | 133 | 180 | No hit | No description |
Pfam | PF00170 | 1.4E-11 | 133 | 180 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.74E-10 | 133 | 179 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 136 | 151 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MTLEEFLVKA GVVREIPTAP AVPPPPMQPR PVPVVPKGPS FYGNFPSAND AGAAALGFAP 60 VAMGDLAMGN GLMPRAVGMG GAPLVVQTAV NPVDSGSKGS EDLSSPSEPM PYSFEGIVRG 120 RRTGGGVEKV VERRQRRMIK NRESAARSRA RKQAYTMELE AEVQKLKDLN QELVRKQAEI 180 LEMQKRENNA KMFC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB362818 | 0.0 | AB362818.1 Triticum aestivum Wabi5-1 mRNA for basic region leucine zipper protein, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177660.1 | 1e-104 | bZIP transcription factor TRAB1-like isoform X1 | ||||
Swissprot | Q6ZDF3 | 1e-59 | TRAB1_ORYSJ; bZIP transcription factor TRAB1 | ||||
TrEMBL | M8A5I4 | 1e-136 | M8A5I4_TRIUA; BZIP transcription factor TRAB1 | ||||
STRING | TRIUR3_26781-P1 | 1e-137 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.1 | 8e-20 | ABRE binding factor 4 |
Publications ? help Back to Top | |||
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