PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_25713-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 607aa    MW: 67383.3 Da    PI: 6.7914
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_25713-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.81.8e-481132621128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........................kvkaeekewyfFskrdkkyat 70 
                      lppGf FhP+d elv +yLkkk+ g+k+e  ++i+evdiyk+ePwdLp                         +v +++++w+fF+ rd+ky++
  TRIUR3_25713-P1 113 LPPGFGFHPKDTELVAHYLKKKILGQKIEY-DIIPEVDIYKHEPWDLPDficrvlqilivpnplmilhvtakcNVPTQDNKWHFFAARDRKYPN 205
                      79****************************.99***************5599*************999888776666999************** PP

              NAM  71 gkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      g r+nrat +gyWk+tgkd+++++ +++++g+kktLvf++gr p+g++t+W+mhey +
  TRIUR3_25713-P1 206 GARSNRATVAGYWKSTGKDRAIKV-DKRTIGTKKTLVFHEGRPPTGKRTEWIMHEYYI 262
                      ************************.999****************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-53104284IPR003441NAC domain
PROSITE profilePS5100551.915113285IPR003441NAC domain
PfamPF023653.6E-24114261IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MDVSSRILVV DISIFATNNF KVYGKFLQGR RDGDSSLKMK YRAPLLAPVP VMRLASSVGA  60
WRLDPSDLHS SSTAVVVLVR WFYGALTRRF PDCLLQQRLP GSYTMETLRD MALPPGFGFH  120
PKDTELVAHY LKKKILGQKI EYDIIPEVDI YKHEPWDLPD FICRVLQILI VPNPLMILHV  180
TAKCNVPTQD NKWHFFAARD RKYPNGARSN RATVAGYWKS TGKDRAIKVD KRTIGTKKTL  240
VFHEGRPPTG KRTEWIMHEY YIDENECQAC PDMKDAFVLC KVTKRIDWTS ENGNEVGNNN  300
PQPQQANVAA ILAVSVEQPD TAASSIIGDE LPSDAATVAI PAHTTPDGND DLKEWLEELL  360
DTSFDPSANT AVDSVSAQLS PDEQNAESSN IGAMAPKVEL DYASPNQTVV DDTDFLLPDD  420
IHSMLYPGSD DFTSWQQTYF TAADPFSLSN NFMEEFQMKE LQLPLENNGP NLYEPADTGI  480
VVRTRHGGTS AASAPPYKAR LQQSLGRMVT SSSESINQTI KFVDNNGHLD LMTNVKHQKK  540
HVRDITSARQ SDAKKCGGHN NQGFLRGVQR AFRGCSATGL NILVALCMVG VAAAILHHGR  600
HRGGISL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-4111026012138Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU0017230.0GU001723.1 Triticum aestivum cultivar Suwon11 NAC-domain transcription factor (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020191215.10.0NAC domain-containing protein 74-like
SwissprotQ7GCL70.0NAC74_ORYSJ; NAC domain-containing protein 74
TrEMBLM7ZG100.0M7ZG10_TRIUA; NAC domain-containing protein 74
STRINGTRIUR3_25713-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75603847
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.15e-60NAC domain containing protein 86
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]