PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_24481-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 641aa    MW: 69783.4 Da    PI: 7.7524
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_24481-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30229285259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      +DgynWrKYG+K+vk+se+p sYY+C++++Cpvkkkver++ d++++ei+Y+g+Hnh+
  TRIUR3_24481-P1 229 EDGYNWRKYGKKQVKNSEHPTSYYKCSHQNCPVKKKVERCQ-DGDITEIVYKGSHNHP 285
                      8****************************************.***************7 PP
2WRKY103.98.5e-33423481159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      ldDgy+WrKYGqK+vkg+++prsYY+Ct+++Cpv+k+ver+++d k v++tYeg+H+he
  TRIUR3_24481-P1 423 LDDGYCWRKYGQKVVKGNPNPRSYYKCTHPSCPVRKHVERASNDLKSVITTYEGKHTHE 481
                      59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081120.151223287IPR003657WRKY domain
SuperFamilySSF1182901.44E-24227286IPR003657WRKY domain
SMARTSM007746.3E-34228286IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-27228285IPR003657WRKY domain
PfamPF031061.5E-23229285IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-35408483IPR003657WRKY domain
SuperFamilySSF1182901.7E-28415483IPR003657WRKY domain
PROSITE profilePS5081135.347418483IPR003657WRKY domain
SMARTSM007741.9E-37423482IPR003657WRKY domain
PfamPF031061.4E-24424481IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 641 aa     Download sequence    Send to blast
MAGASNRRGA VMEDWMLSTP SPRTLMLSLF NDDFSSGPFS DVSSDSGSNK PHDGMERSKA  60
SVGSSPGESS QVTKTSLHFE PNLFDANEKS SPDSGSPAER NGFCALKIDT SRVGFSASIR  120
SPIIIPPGAQ PSPTTGKLPF LMRTNANTTI PSVHKKAQEL SHDDHTISFQ QILRSKPTFS  180
FVDKGPSVTH HNQPLASENN HRIPDNEQED SKANRNGDDS PATIIVRAED GYNWRKYGKK  240
QVKNSEHPTS YYKCSHQNCP VKKKVERCQD GDITEIVYKG SHNHPLLPPD RRPSVPFSHS  300
NDLQADGEEN ALDDHFQHAH GEVPATNLSA SLNREGFADR SATREAIDVS PPTLSGEDNN  360
REAHGTVSSG IDRDQDVTES KRMMMDYVTP ATAIGTIDIG ALASRAVREA RVIVQTTSEV  420
DVLDDGYCWR KYGQKVVKGN PNPRSYYKCT HPSCPVRKHV ERASNDLKSV ITTYEGKHTH  480
EVPADRNNGY PSSGHGDVAP LPQANGLHWR SGPAQGGIIP QYSGAAAYGS LAQLGVAGGF  540
PFGMLPRGLA LVPVPAQMMA GHPSAMQGNP RLVLQAREVK GNPAARPADQ SGTGPAAYQQ  600
LMSRLSQGPN IFTSWLQRTR LTEKGNTENS NDFKQEKWIK I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-33414484878Probable WRKY transcription factor 4
2lex_A2e-33414484878Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820553.10.0probable WRKY transcription factor 2
RefseqXP_025820554.10.0probable WRKY transcription factor 2
RefseqXP_025820555.10.0probable WRKY transcription factor 2
RefseqXP_025820556.10.0probable WRKY transcription factor 2
TrEMBLM7YVD20.0M7YVD2_TRIUA; Putative WRKY transcription factor 2
STRINGTRIUR3_24481-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.14e-79WRKY DNA-binding protein 2