PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_22118-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 284aa    MW: 31675.9 Da    PI: 5.0368
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_22118-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.52e-13210234126
              NAM  34 ikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkge 117
                      i+e d+y ++P+dL +       +++++ wyfF+  + k   g r+ r    ++g W++   +k+v+s+   +g l g ++ + f ++++   +
  TRIUR3_22118-P1   2 IHEGDVYAAHPEDLTQqyaaaVSSNGDEAWYFFTAVRAKG--GGRRGRtvDSQEGCWHSEAGSKPVVSAhhhGGGLLGHRQNFSFVTKEDGVRV 93 
                      8899**********8535554333477899***9988775..445555245679******99****9987777778**********99999999 PP

              NAM 118 ktdWvmhey 126
                      ++ W+m e 
  TRIUR3_22118-P1  94 RSGWLMVEL 102
                      ******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-231120IPR003441NAC domain
PROSITE profilePS5100525.71120IPR003441NAC domain
PfamPF023653.8E-713102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
FIHEGDVYAA HPEDLTQQYA AAVSSNGDEA WYFFTAVRAK GGGRRGRTVD SQEGCWHSEA  60
GSKPVVSAHH HGGGLLGHRQ NFSFVTKEDG VRVRSGWLMV ELGLHGDGQD EVTLCKVYFS  120
PRAAKNNKEP AASSSARKRK ADADSPAPAR QYRRRREMNQ DDHPVEKQDV EAGEQEGLVE  180
ESSADEHEAV DPNDFFWWLR NKEKVRLALG ISEEDFYSPP SAAALERSFG PDWPPAAPPS  240
SPVVPNEDKS VVMWLTYEEL NDLPEVREFL SPTKLLEEMR SSVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137155KRKADADSPAPARQYRRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020193093.10.0NAC domain-containing protein 92-like
TrEMBLT1MVV30.0T1MVV3_TRIUA; Uncharacterized protein
STRINGTRIUR3_22118-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40112972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55210.11e-06NAC domain containing protein 63