PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_19588-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 119aa MW: 13619 Da PI: 4.9404 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.9 | 2.5e-14 | 5 | 56 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + +r++r++kNRe+A rsR+RK+a+i+eLe v +Le+e +L e ee ++ TRIUR3_19588-P1 5 ATQRQKRMIKNRESAARSRERKQAYIAELEAQVTQLEEEHAELLREQEEQNE 56 679*************************************999988776555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.1E-9 | 2 | 65 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.76 | 5 | 57 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.4E-13 | 5 | 57 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.18E-16 | 7 | 54 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-13 | 8 | 56 | No hit | No description |
SuperFamily | SSF57959 | 1.5E-11 | 8 | 55 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 10 | 25 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MDRAATQRQK RMIKNRESAA RSRERKQAYI AELEAQVTQL EEEHAELLRE QEEQNEKRLN 60 EANAAGFKAG TGAFLYAPVY EVTATTTTEK EEEKERDRAA AWAGGDALPP PPRRRMEED |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00648 | PBM | Transfer from LOC_Os05g36160 | Download |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT224373 | 5e-95 | KT224373.1 Triticum aestivum cultivar RAC875 bZIP2 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003568373.1 | 5e-32 | bZIP transcription factor 12 | ||||
Refseq | XP_020178558.1 | 5e-32 | G-box-binding factor 4-like | ||||
Swissprot | Q0JHF1 | 5e-25 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | M7YJC4 | 2e-78 | M7YJC4_TRIUA; G-box-binding factor 4 | ||||
STRING | TRIUR3_19588-P1 | 3e-79 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 6e-13 | G-box binding factor 4 |
Publications ? help Back to Top | |||
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