PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_11128-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 436aa    MW: 49647.4 Da    PI: 6.6766
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_11128-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix82.65.4e-26118214186
         trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 
                      +Wt+++v++Li+a ++++e+ +++            kk++W+++sk+m erg+++sp+qC++k+++lnkryk+++++ +++ t++++++ +++d
  TRIUR3_11128-P1 118 KWTDSMVKLLITAASYTGEDPGADLgcgrrncamvHKKGKWKAISKVMGERGCNVSPQQCEDKFNDLNKRYKRLTDILGRGtTCKVVENPALLD 211
                      7*********************8633466677888**********************************************77*********** PP

         trihelix  84 qle 86 
                      +++
  TRIUR3_11128-P1 212 RMD 214
                      **8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.6E-20116240No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MEGNNLPPGN FMQGATYGSS DLHRNPMQMH GPSSGNQGFN HSQIPGKFPM PMNQVTDSDH  60
LSEFQFRGQR KADHHQVHHH HYHKKDSMSD DEEHGLNEDT TDSHSSKGKK GSAWQRMKWT  120
DSMVKLLITA ASYTGEDPGA DLGCGRRNCA MVHKKGKWKA ISKVMGERGC NVSPQQCEDK  180
FNDLNKRYKR LTDILGRGTT CKVVENPALL DRMDNLSDKL KDDARKILSS RHLFYEEMCS  240
YHNNNRISLP EDLPLQRSLQ FALRCKEEND MMRGASGDAD EDDQSSDSDY EEDNDEDHHV  300
AHSNKGGLPM QKKMRYTADH EDAGSHECSR RSNPHGIALD INKVVPDGTS LALTQKGLVL  360
QSAELEKQCL KIENEALELA EQRLKWELSS KIKDKELERM RSDNEHMKIE IKHLELEVRR  420
KELELELKLK GNVNHS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020196126.10.0uncharacterized protein LOC109781950
RefseqXP_020196127.10.0uncharacterized protein LOC109781950
RefseqXP_020196128.10.0uncharacterized protein LOC109781950
TrEMBLM7ZGL50.0M7ZGL5_TRIUA; Uncharacterized protein
STRINGTRIUR3_11128-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29203886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.14e-98sequence-specific DNA binding transcription factors