PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_09991-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 205aa    MW: 22184 Da    PI: 8.8877
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_09991-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.9e-141764355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     r+h+e+Er+RR+riN  +++Lr+l+P+a      +++Ka+ L ++v+++++Lq
  TRIUR3_09991-P1 17 RSHSEAERKRRQRINAHLATLRTLVPSA-----SRMDKAALLGEVVRHVRELQ 64
                     58*************************9.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.7131463IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.84E-131764No hitNo description
SuperFamilySSF474593.14E-141770IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-121764IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-151766IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.6E-132069IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MATDGECSTP GKGATVRSHS EAERKRRQRI NAHLATLRTL VPSASRMDKA ALLGEVVRHV  60
RELQGRANDA TEGVVDVVPG ETDEVGVEEG DYINGGSTDD DPRWRRRVRA WVCCADRPGL  120
MSDLGRAVRS VGSARPARAE IATVGGRTRS VLELDHVYLQ AEPANDRAVA LSTLRAALRT  180
VLLNREELLA AAAAVDGYKR PRLSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12227ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7279687e-43KJ727968.1 Zea mays clone pUT6081 bHLH transcription factor (bHLH169) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020197761.11e-103transcription factor AIG1-like
TrEMBLT1LY151e-142T1LY15_TRIUA; Uncharacterized protein
STRINGTRIUR3_09991-P11e-143(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP41143569
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-15bHLH family protein