PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_03043-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 611aa    MW: 63462.4 Da    PI: 9.5345
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_03043-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48e-30235294159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg Hnh+
  TRIUR3_03043-P1 235 MNDGCQWRKYGQKISKGNPCPRAYYRCTIAtGCPVRKQVQRCAEDMSILITTYEGAHNHP 294
                      58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-31220294IPR003657WRKY domain
SuperFamilySSF1182909.02E-27228295IPR003657WRKY domain
PROSITE profilePS5081127.921230296IPR003657WRKY domain
SMARTSM007742.3E-36235295IPR003657WRKY domain
PfamPF031063.9E-26236294IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MIKGDQRQLG GHEDRLKDQM GDDHRASDGK FFRFLQNQSS AKKEAQEDKI ASTRAEMGEV  60
RKENERLKTM LSRMVEDHRS LQKQFDVLHQ QGRGKNLAVG SPEHTSSADG IKDPRFVSLR  120
LGTSASTSRQ DMGEEIRTGT NNADGKCISL GLSSGKAIGA AGQSEMKVQP DVLTLSPGGS  180
SEDDAATETT TTSSKVPKNP RSTGGGAEAE EEVAQQPLAK KARVSVRARC DTPTMNDGCQ  240
WRKYGQKISK GNPCPRAYYR CTIATGCPVR KQVQRCAEDM SILITTYEGA HNHPLSPSAA  300
AMASTTSAAA SMLMSGSSTS LGFPSVASSL HGLRFGLPAA TTFDPSSHLS GRPFFLPAAA  360
GASISATPSY PTITLDLTSQ TASQQAFSLS NTNRFSSSFP DSHGHSSSAG RYPSTNFSFS  420
GSGASSLPGA TAWPAGVGSY LSYGPSSGAP YNGVGKNSFQ AALSGINGRQ QASVASLYQP  480
AQVQQRAAQF SGGGTCTTAP IVLTDTIAKA ITSDPGFHTA LAAAITSYVG KPAAGGGKGL  540
EWGEHLGLGP SSAASTACSS PLLARSSTGA TQSGSPHGKK MSFLQPSLAL SSGSTSATAS  600
TSPVKSREHI N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-202352951776Probable WRKY transcription factor 4
2ayd_A5e-20222297175WRKY transcription factor 1
2lex_A5e-202352951776Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020199175.10.0probable WRKY transcription factor 61
TrEMBLM7YJY70.0M7YJY7_TRIUA; Putative WRKY transcription factor 72
STRINGTRIUR3_03043-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50473862
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.17e-61WRKY DNA-binding protein 61