PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.4G081100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 326aa MW: 35254.3 Da PI: 9.6995 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.1 | 5.9e-16 | 245 | 298 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkeva 57 +r+rr++kNRe+A rsR+RK+a+i eLe +v++L+++N++L+ k++e+lkk+ + Sevir.4G081100.1.p 245 RRQRRMIKNRESAARSRARKQAYIMELEAEVAKLKEQNDELQkKQVEMLKKQKD 298 79**************************************96156888888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-13 | 241 | 306 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.082 | 243 | 288 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.14E-26 | 245 | 299 | No hit | No description |
SuperFamily | SSF57959 | 4.85E-11 | 245 | 291 | No hit | No description |
Pfam | PF00170 | 3.1E-13 | 245 | 300 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.2E-15 | 245 | 299 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 248 | 263 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence Send to blast |
MERQGSIYSL TFDEFQSALG GASKDFGSMN MDELLRNIWT AEESNAMAAA APATAAASAH 60 HHHQQQPAAP IQRQGSFTLP RTLSQKTVDE VWREIVGLTG GEDEPPVPPP APAAPPAPLP 120 AQAQAQRQPT LGSMTLEEFL VRAGVVREDM GQQPLVLPPH AQALFSQGNA VAPQTLQLGN 180 GMVTAVVGQG LGGAMTVAAP TTPVVLNGMG KVEAGDLSSL SPVPYPFDTA LRVRKGPTVE 240 KVVERRQRRM IKNRESAARS RARKQAYIME LEAEVAKLKE QNDELQKKQV EMLKKQKDEV 300 LERINNQLGP KAKKLCLRRT LTGPW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.4G081100.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU965197 | 0.0 | EU965197.1 Zea mays clone 284430 bZIP transcription factor family protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004964902.1 | 0.0 | bZIP transcription factor 46 | ||||
Swissprot | Q69TW5 | 1e-142 | BZP46_ORYSJ; bZIP transcription factor 46 | ||||
TrEMBL | K3XY81 | 0.0 | K3XY81_SETIT; Uncharacterized protein | ||||
STRING | Si006889m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.1 | 2e-66 | abscisic acid responsive element-binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.4G081100.1.p |