PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0477s0020.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26133.4 Da PI: 10.4169 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.5 | 8.7e-10 | 109 | 150 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ g+ ++Aa ++++a+ SapurV1A.0477s0020.1.p 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQDDAAHLYDRAAF 150 79**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 9.8E-4 | 108 | 165 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-7 | 109 | 153 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.0E-5 | 111 | 155 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence Send to blast |
MVSLRRRKLL GLCAGRSSFL TPLPRFFDNG TPPVGSAQNG RSVSVHPLPS DDANLPEEKT 60 IAKVGAGSSN VSASSSSKEQ RSQPYPEQPV KRRKRHRRKH VQNQEPCLMR GVYFKNMKWQ 120 AAIKVDKKQI HLGTVGSQDD AAHLYDRAAF MCGREPNFEL SEEEKQELRK FKWDEFLAIT 180 RSAINNKKHK RRIGVGLQKR SETTLQDGDW DGKERLNGFS ASEDVEPDSS AS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0477s0020.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002303060.2 | 1e-147 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_006386877.1 | 1e-147 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_006386878.1 | 1e-147 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_024451173.1 | 1e-147 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_024451174.1 | 1e-147 | ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | B9GQL7 | 1e-146 | B9GQL7_POPTR; ERF family protein | ||||
STRING | POPTR_0002s24750.4 | 1e-147 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5457 | 32 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 4e-47 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0477s0020.1.p |