PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0078s0470.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 351aa    MW: 39047.6 Da    PI: 4.8027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0078s0470.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-17131179254
                     AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                             +  GVr++k +g+W+AeIr p++   ++r +lg+f+t eeAa+a++a ++++e
  SapurV1A.0078s0470.1.p 131 KPVGVRQRK-WGKWAAEIRNPVT---KARTWLGTFDTLEEAAQAYEAKKQEYE 179
                             789*****9.**********654...5***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.21E-21130195No hitNo description
SMARTSM003802.5E-15131199IPR001471AP2/ERF domain
PROSITE profilePS5103218.255131193IPR001471AP2/ERF domain
PfamPF008475.5E-12131180IPR001471AP2/ERF domain
PRINTSPR003673.6E-7132143IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-15133178IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.2E-19134175IPR001471AP2/ERF domain
PRINTSPR003673.6E-7154170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MPPKRQSLLY TTSGKKPNDT KRILSELKME STMRKIRVIC YDPYATESDS SDDESDKKSF  60
RKRFVREINL PLVVTPQPKT FEPESSCQES NNSAKSPGKK RRVLTEPGKK KRVLPETPTS  120
TFEGKKLAPK KPVGVRQRKW GKWAAEIRNP VTKARTWLGT FDTLEEAAQA YEAKKQEYEA  180
LAMLASQKSQ NIPSSLAISQ SHSHNSSKKQ VSSASSEDTD DSVVSHTSPA SVLERDTSVL  240
TVTGECALVI KDEDVGSSVA DLEIPDLDFM NDPLASCSMD QDLNLSLDLG NLIDEFGRFY  300
DDYCGIDDLS ICGINGEEPG ELPDYDFEFG NEEFNYLDDH QQKPPNIACL *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199111KRRVLTEPGKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0078s0470.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002315943.20.0ethylene-responsive transcription factor ERF119
RefseqXP_011007949.10.0PREDICTED: ethylene-responsive transcription factor ERF119
RefseqXP_011007956.10.0PREDICTED: ethylene-responsive transcription factor ERF119
TrEMBLB9HWI20.0B9HWI2_POPTR; Uncharacterized protein
STRINGPOPTR_0010s13540.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25890.21e-23ERF family protein