PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00022569-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family NAC
Protein Properties Length: 233aa    MW: 26171.9 Da    PI: 9.2423
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00022569-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.28.6e-29111691128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...................................... 49 
                            lppGfrF+Ptdee+v +yL +k+ +++l++  vi+e+d+++++P +Lp +                                      
  SMil_00022569-RA_Salv  11 LPPGFRFEPTDEEIVFQYLSRKTFSHPLPA-LVIPELDVFTYDPCHLPgQvtglghsadqglsagatrlhgincddeaqsvgktlplq 97 
                            79**************************99.78***************5489*********************999998877777665 PP

                    NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             +  + +++yfF++++      ++  ra + g+Wka g  k+++++ k   +g++k++vf++  + k ++t+W+mhey l
  SMil_00022569-RA_Salv  98 PIGDGGQDMYFFCNKEG-----RKMGRASECGFWKANGLPKRIICSkKMPIIGIRKSFVFHR--RTK-QRTQWIMHEYYL 169
                            444588899****9865.....5789999**********9999986344559*********4..333.58********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-16960IPR003441NAC domain
PROSITE profilePS5100536.80911193IPR003441NAC domain
PfamPF023657.1E-2212168IPR003441NAC domain
SuperFamilySSF1019414.58E-19102193IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MNIVREGGSK LPPGFRFEPT DEEIVFQYLS RKTFSHPLPA LVIPELDVFT YDPCHLPGQV  60
TGLGHSADQG LSAGATRLHG INCDDEAQSV GKTLPLQPIG DGGQDMYFFC NKEGRKMGRA  120
SECGFWKANG LPKRIICSKK MPIIGIRKSF VFHRRTKQRT QWIMHEYYLA LSQNTHQDLV  180
RIGNWTLCRI FLKKLRVNAR KVDDVRSRDL LSDSYSSSAS STDSGIFTEV SSS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083447.13e-56NAC domain-containing protein 83
TrEMBLA0A4D8ZWT52e-57A0A4D8ZWT5_SALSN; Uncharacterized protein
STRINGMigut.D01296.1.p3e-54(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-37NAC domain containing protein 83