PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00012823-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 303aa    MW: 33504.2 Da    PI: 5.6116
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00012823-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.26.7e-17152205460
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                            +kr +r+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l   +++    k
  SMil_00012823-RA_Salv 152 VKRIKRMVSNRESARRSRRRKQAHLADLEQQVEQLRGENATLFKQLADATQQF---K 205
                            79****************************************96665554444...3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-18149213IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.197151205IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.2E-13151205No hitNo description
PfamPF001702.1E-14152202IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.73E-12153203No hitNo description
CDDcd147025.36E-8154204No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
LQSTMDNKKT ILKNSSIYGC SDMKKSQSEL ALQELFASED DRKFHHFEGS DSYHALFAMD  60
HADHVTFPFK NLEIRREISA SNALAEPPVW PWKPIESQSS ICVDSPTSVY TSKGADNQAV  120
GASSGSSHDQ SDEEDMEIEA GSYDPTTNPI DVKRIKRMVS NRESARRSRR RKQAHLADLE  180
QQVEQLRGEN ATLFKQLADA TQQFKDSTTN NRVLRSDVEA LRAKVKLAED MVARGSLTSS  240
LSHLLQNYLT TPQDYISSSG IPPVMGARAD TYSGSAAVGL HGVVGDAVPD IWTWEVDPIP  300
SSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165172RRSRRRKQ
2167172SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847251.11e-117PREDICTED: basic leucine zipper 9
TrEMBLA0A4D8ZZ791e-156A0A4D8ZZ79_SALSN; Uncharacterized protein
STRINGMigut.E01416.1.p1e-117(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81392229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-52basic leucine zipper 9