PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00003821-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | bZIP | ||||||||
Protein Properties | Length: 180aa MW: 20720.8 Da PI: 6.5148 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.2 | 9.9e-15 | 65 | 115 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK+ ++eL v L +eN++L+++l++ ++ SMil_00003821-RA_Salv 65 RKQRRMISNRESARRSRMRKQRHLDELWSQVLRLRTENHSLIEKLNHVSES 115 79********************************************99876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-16 | 61 | 125 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.105 | 63 | 126 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-12 | 65 | 138 | No hit | No description |
Pfam | PF00170 | 1.8E-12 | 65 | 115 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.22E-12 | 65 | 115 | No hit | No description |
CDD | cd14702 | 8.56E-18 | 66 | 117 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 68 | 83 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MIQSEFQELN YFSPAESLPS FPGSFCLKQS SSGFLRNLQG NYPSPNSTSN STSDEADDQQ 60 AIDERKQRRM ISNRESARRS RMRKQRHLDE LWSQVLRLRT ENHSLIEKLN HVSESHDRVV 120 QENAKLKEEA SDLRQMLTDI QISNSYAIFR DLDDIPCNTA YLRAESSSNH SVTTSSNLLH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 84 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011077776.1 | 4e-83 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 2e-38 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A4D8ZGQ4 | 4e-89 | A0A4D8ZGQ4_SALSN; Uncharacterized protein | ||||
STRING | POPTR_0008s11260.1 | 2e-66 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA947 | 24 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-45 | basic leucine-zipper 42 |
Publications ? help Back to Top | |||
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