 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Rsa1.0_04490.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
|
| Family |
MYB_related |
| Protein Properties |
Length: 223aa MW: 25341 Da PI: 4.8042 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Rsa1.0_04490.1_g00001.1 | genome | RGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 58 | 2.2e-18 | 31 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ll ++v+ G g+W+++a + g++R++k+c++rw +yl
Rsa1.0_04490.1_g00001.1 31 KGPWTPEEDKLLTEYVASSGEGRWSSVATCAGLNRSGKSCRLRWVNYL 78
79********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MLDWKVDQVH QRNHDHEPYQ KPQQQLQGCR KGPWTPEEDK LLTEYVASSG EGRWSSVATC 60
AGLNRSGKSC RLRWVNYLRP GLKRGQITPE EEGIILELHS LWGLQPQPQN QRSQLVSQDH 120
MNLDNEQNIA SSFSYPLIVI NDQFHMPQSV TATSSDYSMI DECNLWGSLW SLHDEDLQSN 180
GGDWEQRPAA DIAEKFNGGR IEAPPCGSGE YNYNGFYTGG YIL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AF371980 | 1e-87 | AF371980.2 Arabidopsis thaliana putative transcription factor MYB121 (MYB121) mRNA, complete cds. |
| GenBank | AY519593 | 1e-87 | AY519593.1 Arabidopsis thaliana MYB transcription factor (At3g30210) mRNA, complete cds. |
