PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G198700.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 232aa    MW: 26301.6 Da    PI: 9.5675
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G198700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.99.2e-12108149351
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Prupe.8G198700.1.p 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 149
                         79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-6107150IPR001471AP2/ERF domain
SMARTSM003801.3E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-8108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MVSLRRRRLL GLCSGVSPVL DPLPRACDNG TVPQNFSRTN PVSVHPMPSN DANQPDGNAS  60
VKVEARSPTA SGSSLSKEQH DQQVAGPPIK RRKRHRRKHF QNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEEA ARLYDRAAFM CGREPNFELS EEEKQELRKF KWDEFLAMTR  180
HAITNKKHRR RPGAESHKRS ETPLENGDWD DKEEVDSLSA SEDMEQDMLG S*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G198700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007201882.21e-174ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP92e-40ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A251N0E61e-172A0A251N0E6_PRUPE; Uncharacterized protein
STRINGXP_008235440.11e-170(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.16e-48ERF family protein