PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.8G160700.1.p
Common NamePRUPE_ppa008347mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 337aa    MW: 37438.7 Da    PI: 6.723
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.8G160700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.2e-0959106354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  Prupe.8G160700.1.p  59 IQKADREKLRRDRLNEQFLELGNVLDPD----RPKNDKATILADTIQVLKDL 106
                         56789*******************9997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.94456106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-1256124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.45E-757110No hitNo description
Gene3DG3DSA:4.10.280.101.3E-1157128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-759106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-762112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MDQQFKHEGF IQSAPPPFPS AIEFPQPPPD SRAPSGRSQP NSSQRPEGET KDCLTARKIQ  60
KADREKLRRD RLNEQFLELG NVLDPDRPKN DKATILADTI QVLKDLTSEV DKLKADCASL  120
TEESRELTHE KNDLREEKAS LKSDIENLNA QYQQRLRAMF PWGAMDHSVV MAPPSYPYPM  180
PMPMPPGPIP MHPHMQPYHY FPNQNPGVIP NPCSTFVPYV TPNTLVEQQS TQYVSPVVHP  240
GSRSHVSGKQ DSRNKLSGES KIDRSEDSND VTTELELKTP GSMTDQDLSS VRRKSQKSAR  300
KEIKVTEGSS SSRCSSSRSV QDSSSNSVVG GTKADD*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.8G160700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007200377.10.0transcription factor bHLH121
SwissprotQ9LT231e-97BH121_ARATH; Transcription factor bHLH121
TrEMBLM5VL490.0M5VL49_PRUPE; Uncharacterized protein
STRINGEMJ015760.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.14e-87bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]