PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.7G064900.1.p

Common Name

PRUPE_ppa018568mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 327aa MW: 37287.9 Da PI: 6.078

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.7G064900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	139.8	1.7e-43	26	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89 lp G+rF Pt+eelv eyLkkk++++ l++ + ++evd+yk++P++L ++ +e+ewyfFs+r++ky++g+r+nr a ++gyWkatg+d Prupe.7G064900.1.p 26 LPSGYRFVPTNEELVEEYLKKKIKNELLPI-NRFREVDVYKYHPEELTgMHNLLRENEWYFFSSRERKYPNGSRPNRaADNHGYWKATGTD 115 699*************************.77**********8433334899****************66779***** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ ++e++g k++L fy g++ +g+kt+W mhey l Prupe.7G064900.1.p 116 DKIKV-NNEVIGQKRILDFYAGKHGEGVKTEWKMHEYVL 153 *.999**************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-50	22	181	IPR003441	NAC domain
PROSITE profile	PS51005	49.16	26	182	IPR003441	NAC domain
Pfam	PF02365	2.1E-22	27	153	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MEESNIQVSH EIFDEAWLTD KYINDLPSGY RFVPTNEELV EEYLKKKIKN ELLPINRFRE 60 VDVYKYHPEE LTGMHNLLRE NEWYFFSSRE RKYPNGSRPN RAADNHGYWK ATGTDDKIKV 120 NNEVIGQKRI LDFYAGKHGE GVKTEWKMHE YVLSGNIAPS NGHKANGDMK LNDCVLCKIY 180 KNKRVKKNKN KGIADSVQSA HQHDHQEYPS PLIANSNSSS SSINHHYTAA GMSSTTVNTE 240 FGEPPYYNES FQNGAWSNYP WPITSFNNHR TLDSAYTSHG LPMNTFSSPF STDLEPANDT 300 ALADPSTSSQ IPHDHAEEDD NNSFDI*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-43	26	183	17	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-43	26	183	17	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-43	26	183	17	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-43	26	183	17	166	NO APICAL MERISTEM PROTEIN
3swm_A	1e-43	26	183	20	169	NAC domain-containing protein 19
3swm_B	1e-43	26	183	20	169	NAC domain-containing protein 19
3swm_C	1e-43	26	183	20	169	NAC domain-containing protein 19
3swm_D	1e-43	26	183	20	169	NAC domain-containing protein 19
3swp_A	1e-43	26	183	20	169	NAC domain-containing protein 19
3swp_B	1e-43	26	183	20	169	NAC domain-containing protein 19
3swp_C	1e-43	26	183	20	169	NAC domain-containing protein 19
3swp_D	1e-43	26	183	20	169	NAC domain-containing protein 19
4dul_A	1e-43	26	183	17	166	NAC domain-containing protein 19
4dul_B	1e-43	26	183	17	166	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.7G064900.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	FM253563	0.0	FM253563.1 Prunus cerasifera BAC insert containing Ma gene, resistant Ma1 allele, clone 76H19.
GenBank	FM253564	0.0	FM253564.1 Prunus cerasifera BAC insert containing Ma gene, ma1 susceptible allele, clone 40K9.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007202204.2	0.0	NAC transcription factor 29
TrEMBL	A0A251N7L2	0.0	A0A251N7L2_PRUPE; Uncharacterized protein
STRING	EMJ03403	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15078	7	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	2e-43	NAC family protein

Link Out ? help Back to Top
Phytozome	Prupe.7G064900.1.p
Entrez Gene	18770004