PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G063600.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 283aa    MW: 31111.6 Da    PI: 8.2796
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G063600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-05255276323
                         ETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                         Cp+C+k F+++  L+ H  + H
  Prupe.7G063600.1.p 255 CPKCSKGFRDPAALVEHVERdH 276
                         *****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510397.4341072IPR000058Zinc finger, AN1-type
SMARTSM001540.0173168IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.11E-83674No hitNo description
PfamPF014282.8E-103667IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.102.5E-83670IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.101.5E-10106163IPR000058Zinc finger, AN1-type
SuperFamilySSF1183107.32E-8109159No hitNo description
PROSITE profilePS510397.745114167IPR000058Zinc finger, AN1-type
SMARTSM001540.047117158IPR000058Zinc finger, AN1-type
PfamPF014286.9E-8117157IPR000058Zinc finger, AN1-type
PROSITE profilePS501579.016215238IPR007087Zinc finger, C2H2
SMARTSM003550.97215238IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280217238IPR007087Zinc finger, C2H2
PROSITE profilePS501578.808253281IPR007087Zinc finger, C2H2
SMARTSM003556.6253276IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280255276IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
METPEFPDLG RHCYLFRRKT DDLIIAVTAV LIALQKIDFL PFTCNSCHQV FCLEHRSYIK  60
HNCPKANKQN VTVVVCPLCA KGVHLIPDED ANITWERHVN TECDPSNYEK ATKKKKCPVP  120
GCKELLTFSN IIKCRDCTVN HCLKHQFGPD HKCPGPKKPT TSFPFSGLLS GTSSFRASAE  180
ASVAKLSSEL SQKWQIAKDG AGQSSSSGSR NGQLEECPQC GAKFSFVTTL VDHVEKVHEK  240
GGDRAEVKKA TIDACPKCSK GFRDPAALVE HVERDHGGIS RT*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.200830.0fruit
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.7G063600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007202398.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423962.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423963.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423964.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423965.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
RefseqXP_020423966.11e-173zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
SwissprotQ8VZ421e-110SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A251N7L60.0A0A251N7L6_PRUPE; Uncharacterized protein
STRINGEMJ048580.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-111C2H2 family protein