PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.6G345100.1.p | ||||||||
Common Name | PRUPE_ppa007838mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 355aa MW: 39984.8 Da PI: 10.2764 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.1 | 1.4e-31 | 292 | 350 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+vers edp ++++tYegeH+h+ Prupe.6G345100.1.p 292 ADEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERSLEDPAMLVVTYEGEHKHS 350 69************************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 3.6E-13 | 244 | 289 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 9.9E-33 | 279 | 350 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.861 | 286 | 352 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.79E-26 | 289 | 351 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.8E-38 | 291 | 351 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-26 | 293 | 349 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MDEVEEANKA AVESCHGVLS HLCQPKGQVH CKNLLAETEE AVFKFKRVVS LLGGGLGHGR 60 VRKLKKFKPP PLPQNIFLDG PNYRLDISTK PLQLLPPTSL ENRRAEKDSK YGSSLQHTQS 120 QKVFLGNPVV DLDMKIKHPL QIPKTKPLQQ YHFLEQKHDH RQEIQRLQLQ PQQLKYQADT 180 MYSGRNRGIN LAFDRSTTRT PSMSSARSFV SCLSMDGGVA NTHCDSFQLI RGVPQPPDRI 240 SQQQRRCNGA GEKGTVKCGS SGKCQYPKKR KVRVKRSFKV PAISNKIADI PADEYSWRKY 300 GQKPIKGSPY PRGYYKCSSM RGCPARKHVE RSLEDPAMLV VTYEGEHKHS PSDQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 5e-21 | 279 | 349 | 2 | 71 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.6G345100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007205443.1 | 0.0 | probable WRKY transcription factor 74 | ||||
Swissprot | Q93WU6 | 1e-91 | WRK74_ARATH; Probable WRKY transcription factor 74 | ||||
TrEMBL | M5VYW1 | 0.0 | M5VYW1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ06642 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2637 | 34 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 7e-69 | WRKY DNA-binding protein 74 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.6G345100.1.p |
Entrez Gene | 18775103 |
Publications ? help Back to Top | |||
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