PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.4G051400.1.p
Common NamePRUPE_ppa010090mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 265aa    MW: 28447.6 Da    PI: 9.977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.4G051400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.52e-192372255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+ta eAa+a++aa+++++g
  Prupe.4G051400.1.p 23 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAVEAARAYDAAAREFRG 72
                        69*******.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.0E-132372IPR001471AP2/ERF domain
CDDcd000181.60E-202380No hitNo description
SuperFamilySSF541711.44E-212381IPR016177DNA-binding domain
PROSITE profilePS5103223.092380IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-312380IPR001471AP2/ERF domain
SMARTSM003806.5E-392386IPR001471AP2/ERF domain
PRINTSPR003674.8E-102435IPR001471AP2/ERF domain
PRINTSPR003674.8E-104662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MAPREKTATA VRANGNGNVK EVHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAVEAA  60
RAYDAAAREF RGSKAKTNFP LPSENISLNM TKNNNININN NINKNSSGSN NQSPSQSSTV  120
ESSSREPPAL MVDSLPLDLN LAQGVSTGGF GSGPMRFPFQ HHQVPSVGAV IGVPASAAAA  180
ANHVLYFDSV FRAGMVKSHQ FHQRLRFDHH NLQQHDFHAY GGGGVFACGA QSDSDSSSVV  240
DLNNHDLPRG GLLDLNLPPP PELA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-202081264ATERF1
3gcc_A1e-202081264ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.73111e-140fruit| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.4G051400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2230180.0KT223018.1 Prunus persica ethylene responsive factor 9 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211866.10.0ethylene-responsive transcription factor 4
TrEMBLM5X1X60.0M5X1X6_PRUPE; Uncharacterized protein
STRINGEMJ130650.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-31erf domain protein 9