PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G174300.1.p
Common NamePRUPE_ppa026831mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 361aa    MW: 40952 Da    PI: 7.3011
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G174300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1061.9e-33191248259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dgy+WrKYGqK vk+s++prsYYrCt+++C vkk+vers +dp++v++tYeg+Hnh+
  Prupe.3G174300.1.p 191 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCVVKKRVERSFQDPSIVITTYEGQHNHQ 248
                         8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-34175250IPR003657WRKY domain
SuperFamilySSF1182902.62E-29183250IPR003657WRKY domain
PROSITE profilePS5081132.019185250IPR003657WRKY domain
SMARTSM007749.4E-39190249IPR003657WRKY domain
PfamPF031066.6E-26191248IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MSNEKKNPYQ YDPFDYNPHE INRPSFPFFN YGTHSIQDPQ NLHGFESDHP NSSFMSFTDC  60
LHGSMDYNTL SKAFDMSCSS SEVISPQLDH ENSKNQQAAV GDHSVGTSTT ENPSTPNSSV  120
SSSSNEAAGS HEHEDSEKKK KEKQPKVAVC DEAAGDEEDK SKKGSKAKKK EKRQREPRFA  180
FLTKSEVDHL EDGYRWRKYG QKAVKNSPYP RSYYRCTTQK CVVKKRVERS FQDPSIVITT  240
YEGQHNHQCP ATLRGNLNLN AVGMLSPNPL LTSASLNGSA RFQHEFLTQF LPMNNQLQLQ  300
LQSHHHQDDH QASNSMIYSN LVAPHPHHHH QQQHQRQQLH VPDYGLLQDL VPSFGHKQEP  360
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-291832511078Probable WRKY transcription factor 4
2lex_A5e-291832511078Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169174KEKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G174300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007217821.10.0probable WRKY transcription factor 71
TrEMBLM5XJ160.0M5XJ16_PRUPE; Uncharacterized protein
STRINGEMJ190200.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22313483
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.18e-49WRKY DNA-binding protein 28